Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq210337 84.2 2e-11 seq209069 82.4 6e-11 >seq210337 Length=1863 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAAC--AGAACCC 106316 ||||||||| ||||| || || ||||| |||||||| |||||| |||| ||| | | Sbjct 585 AATGCAAATCTTTGTGAAGACTTTGACAGGCAAGACTATTACCTTGGAGGTTGAGAGCTC 526 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 || | || ||| | ||||| |||||| ||||||||||| | || || Sbjct 525 GGACA--CTATTGATAATGTGAAGGCTAAAATTCAGGACAAAGAAGGGATCCCTCCGGAC 468 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 ||||| || || || | || || ||||| | || ||| | ||| ||| |||||| Sbjct 467 CAACAGAGACTCATCTTCGCTGGTAAACAGCTTGAGGATGGTCGGACTTTGGCGGATTAC 408 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGT 106468 || || || |||||||| || || ||||| || Sbjct 407 AATATTCAGAAAGAATCGACTCTTCATTTGGT 376 >seq209069 Length=2205 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 106353 GACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAA 106412 ||||||||||| | || ||||||||||||||| || | ||| | || ||| | ||| Sbjct 1822 GACAAAGAAGGTATACCACCTGATCAACAAAGGCTGATCTTTGCTTGTAAGCAACTTGAA 1763 Query 106413 GATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 ||| || ||| | | ||||||||||| || ||||| || || || ||| | || ||| Sbjct 1762 GATGGTACAACCTTAGCGGATTACAACATCCACAAAGAGTCCACTCTTCATCTTGTCTTG 1703 Query 106473 AGGTTACGAGGAGGA 106487 ||| | |||| ||| Sbjct 1702 AGGCTCAGAGGTGGA 1688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 401019276362624