Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq26661 138 1e-27
seq153189 127 2e-24
seq70799 122 8e-23
seq54724 122 8e-23
seq210337 118 1e-21
seq78792 107 2e-18
seq26664 95.1 1e-14
seq224638 93.3 4e-14
seq117562 91.5 1e-13
seq50902 91.5 1e-13
seq167623 87.8 2e-12
seq214945 82.4 7e-11
>seq26661
Length=2801
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | ||| | |||||| || | ||| |||||||| ||||||||||| |||
Sbjct 1172 CCACCACGAAGCCTTAGCACCAAGTGAAGCGTTGATTCCTTTTGGATGTTGTAATCCGCC 1113
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
||||| || | || |||| ||||| || ||||| || | || |||||| |||| ||||
Sbjct 1112 AAGGTACGGCCATCTTCCAATTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGA 1053
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | ||||||||| |||| ||||| | | |||| | | |||||| ||||||
Sbjct 1052 ATACCTTCCTTGTCCTGGATC-TTTGCCTTAACGTTGTCGATCGTGTCAGAACTTTCCAC 994
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | ||||| || || || || | ||||||||| || ||||||||
Sbjct 993 CTCGAGGGTGATAGTCTTTCCGGTGAGAGTTTTCACGAAGATCTGCAT 946
Score = 122 bits (134), Expect = 8e-23
Identities = 168/231 (73%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | ||||||||| || | || ||||||||| |||||||| |||||
Sbjct 1856 CCACCACGAAGACGCAACACCAAGTGAAGAGTTGACTCCTTTTGGATGTTGTAGTCGGCT 1797
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||||| |||| || || ||||| || || || ||||| | ||||||||||| |||
Sbjct 1796 AGAGTTCGACCGTCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGAGGG 1737
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTC---GCTCGATTC 35685
| | ||||||||| ||| |||||| |||| | | | ||||| |||| ||
Sbjct 1736 ATACCTTCCTTGTCCTGGAT-TTTTGCTTTCACGTTATCAATGGTGTCTGAGCTC---TC 1681
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| | || || || || |||||||| || || ||||| ||||||||
Sbjct 1680 GACCTCGAGGGTAATAGTCTTGCCCGTCAAGGTCTTGACAAAGATCTGCAT 1630
Score = 118 bits (130), Expect = 1e-21
Identities = 167/231 (72%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| | ||| | || | ||| | ||| |||||| ||||||||||| || |||
Sbjct 1628 CCTCCACGAAGCCTGAGGACGAGATGAAGCGTCGACTCCTTCTGAATGTTGTAGTCCGCC 1569
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|||||||| |||| || || ||||| || || || ||||| | |||||| |||| |||
Sbjct 1568 AAGGTTCGGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGATCCGGTGGA 1509
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685
| | ||||||||| |||| || |||| |||| | | ||||| ||| |||
Sbjct 1508 ATACCTTCCTTGTCCTGGATC-TTGGCTTTCACGTTGTCAATTGTGTCTGAGCT---TTC 1453
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| |||| || || || || |||||||| || || ||||| ||||||||
Sbjct 1452 AACTTCCAAAGTAATGGTCTTGCCCGTCAAGGTCTTGACAAAGATCTGCAT 1402
Score = 109 bits (120), Expect = 5e-19
Identities = 142/195 (73%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||||||||| |||||||| ||||| | || || |||| || || ||||| || || ||
Sbjct 1365 CTCCTTTTGGATGTTGTAGTCGGCGAGAGTACGGCCGTCCTCGAGTTGCTTTCCGGCGAA 1306
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||||| ||||||||||| |||| | ||||||||| |||||| ||| | | |
Sbjct 1305 GATCAACCTCTGCTGGTCCGGTGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTGACATT 1246
Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721
| | ||||| ||| || ||||| | || ||||| || ||||||||||| ||
Sbjct 1245 GTCAATGGTGTCAGAACTC---TCAACCTCGAGGGTAATCGTCTTGCCCGTCAAAGTCTT 1189
Query 35722 CACAAATATCTGCAT 35736
|| || ||||||||
Sbjct 1188 GACGAAGATCTGCAT 1174
Score = 109 bits (120), Expect = 5e-19
Identities = 165/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | ||| ||||| || | ||| ||||| |||||||| || ||||||
Sbjct 2084 CCACCACGGAGACGCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTATAGTCGGCC 2025
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || ||||||||||| || || || | ||||||||||||| ||||
Sbjct 2024 AGTGTACGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 1965
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685
| | || |||||| ||| || |||| |||| | | ||||| |||| ||
Sbjct 1964 ATACCTTCTTTGTCC-TGAATCTTAGCTTTCACGTTGTCGATGGTGTCTGAGCTC---TC 1909
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||||| | || || || ||||| ||||| || ||||| || || |||||
Sbjct 1908 CACCTCAAGGGTAATAGTCTTACCAGTCAAGGTCTTCACGAAGATTTGCAT 1858
Score = 91.5 bits (100), Expect = 1e-13
Identities = 138/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || ||||||||||| |||| || || | || || ||||| ||||| |||||
Sbjct 2277 CTCTTTCTGTATGTTGTAATCCGCCAGTGTGCGACCATCCTCGAGCTGTTTACCAGCAAA 2218
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||||| || | | ||||||||| |||||| ||| | | |
Sbjct 2217 GATGAGACGCTGCTGGTCCGGTGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 2158
Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721
| | ||||| ||| || || |||| ||||| || || || || | |||||
Sbjct 2157 GTCAATTGTGTCAGAACTC---TCGACTTCCAGGGTGATAGTCTTGCCGGTTAGGGTTTT 2101
Query 35722 CACAAATATCTGCAT 35736
||| |||||||||||
Sbjct 2100 CACGAATATCTGCAT 2086
>seq153189
Length=17048
Score = 127 bits (140), Expect = 2e-24
Identities = 169/231 (73%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | ||||||||| || | || |||||| ||||||||||| ||||||
Sbjct 14507 CCACCACGAAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGCC 14448
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
||||| || | || |||| ||||| || || || ||||| | |||||| |||| ||||
Sbjct 14447 AAGGTGCGTCCATCTTCCAATTGCTTTCCGGCGAAGATCAATCTCTGCTGATCCGGAGGA 14388
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685
| | ||||||||| |||| || |||| | ||| | | |||||| ||| |||
Sbjct 14387 ATACCTTCCTTGTCCTGGATC-TTGGCTTTAACATTGTCGATCGTGTCCGAGCT---TTC 14332
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||||| | ||||| || || || || | ||| || || || ||||||||
Sbjct 14331 CACCTCGAGGGTGATTGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 14281
Score = 118 bits (130), Expect = 1e-21
Identities = 167/231 (72%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | |||||||| || || || ||||||||||||||||||||| ||
Sbjct 14735 CCACCACGGAGACGTAACACCAAGTGCAAAGTTGACTCCTTTTGAATGTTGTAATCCGCA 14676
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || ||||| ||||| || || || | ||||||||||||| ||
Sbjct 14675 AGTGTGCGACCATCCTCGAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCCGGTGGG 14616
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685
| | ||||||||| |||||| ||| | |||| | | ||||| |||| ||
Sbjct 14615 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCTGAGCTC---TC 14560
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||||| | || || || ||||| ||||| ||||| || || ||||||||
Sbjct 14559 CACCTCGAGGGTAATAGTCTTACCAGTCAAGGTTTTGACGAAGATCTGCAT 14509
Score = 100 bits (110), Expect = 3e-16
Identities = 163/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | |||||||| || || || ||||||||||||||||||||| ||
Sbjct 14963 CCACCACGGAGACGTAACACCAAGTGCAAAGTTGACTCCTTTTGAATGTTGTAATCCGCA 14904
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || ||||| ||||| || || || | ||||||||||||| ||
Sbjct 14903 AGTGTGCGACCATCCTCGAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCCGGTGGG 14844
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685
| | ||||||||| |||||| ||| | |||| | | ||||| |||| ||
Sbjct 14843 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCAGAGCTC---TC 14788
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || | ||||| || || || || | ||| || || || ||||||||
Sbjct 14787 GACTTCAAGGGTGATTGTCTTGCCAGTAAGAGTCTTGACGAAAATCTGCAT 14737
>seq70799
Length=497
Score = 122 bits (134), Expect = 8e-23
Identities = 211/304 (69%), Gaps = 2/304 (1%)
Strand=Plus/Minus
Query 44117 CACCCATGATCCTTTGTGGAACGCTGCCCAAACACAACTGTTGCGAGAAGGTAAAATGCA 44176
||| |||||| | ||||||| |||| |||| ||| || | ||||| || |||||
Sbjct 316 CACACATGATGATCTGTGGAATTCTGCACAAATACAGTTGGTAAAGGAAGGCAAGATGCA 257
Query 44177 CCAATACATGCGTATGTATTGGTGCAAGAAGATATTGGAGTGGTCGGAAGATGCGCAAAC 44236
| | | | || ||||| ||| || |||||| |||| ||| | || | | | |
Sbjct 256 CGGTTTCCTTCGCATGTACTGGGCTAAAAAGATACTGGAATGGACTGATACTCCAGATAG 197
Query 44237 CGCGCTCGTTCATGCCATCTATCTGAACGACAAGTACAGTTTGGACGGTCGCGACCCCAA 44296
|| || | ||||||| ||||| || |||||||| || |||||||||||||||| |
Sbjct 196 AGCACTGGCCGATGCCATTTATCTCAATGACAAGTATAGCATGGACGGTCGCGACCCAAG 137
Query 44297 CGGGTACGTAGGATGTATGTGGTCCATTTGCGGTGTCCACGA-CAGGGCGTGGCGAGAGC 44355
|| | || |||||||||||||| || || ||| | || || ||||| |||| ||||
Sbjct 136 TGGTTTTGTTGGATGTATGTGGTCAATATGTGGTATTCATGATCAGGG-GTGGAGAGAAA 78
Query 44356 TACCCATCTACGGCAAAGTGCGCTACATGAACTACAACGGTTGCGTCAGAAAGTTTGATG 44415
| || | || ||| | | || |||||||| | || ||| |||||||||||
Sbjct 77 GAGAAATTTTTGGAAAAATTAGGTATATGAACTATGAAGGATGCAAGAGAAAGTTTGACA 18
Query 44416 TAAA 44419
||||
Sbjct 17 TAAA 14
>seq54724
Length=7877
Score = 122 bits (134), Expect = 8e-23
Identities = 169/233 (73%), Gaps = 3/233 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | ||| | ||||| || | ||| ||||| || ||||||||||| |||
Sbjct 1645 CCACCACGAAGCCTTAGAACCAAGTGAAGCGTGGATTCCTTCTGGATGTTGTAATCCGCC 1586
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
||||| || | || |||| |||||| || || || ||||| | |||||| |||| ||||
Sbjct 1585 AAGGTACGGCCATCTTCCAACTGCTTTCCGGCGAAGATCAATCTCTGCTGATCCGGAGGA 1526
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | ||||| ||| ||| || || | | |||| | | ||| || ||||||
Sbjct 1525 ATTCCTTCCTTATCC-TGAATCTTAGCCTTAACGTTGTCGATCGTATCAGAACTTTCCAC 1467
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGT 35741
||| | ||||| || || || || | |||||||||||| ||||||| |||||
Sbjct 1466 CTCGAGGGTGATAGTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCA-TCTGT 1415
Score = 122 bits (134), Expect = 8e-23
Identities = 168/231 (73%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | ||||||||| || | ||| ||| || ||||| ||||| ||||||
Sbjct 2101 CCACCACGAAGACGCAACACCAAGTGAAGAGTAGACTCTTTCTGAATATTGTAGTCGGCC 2042
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| |||| |||| || || ||||| || ||||| ||||| | ||||||||||| |||
Sbjct 2041 AGAGTTCTGCCGTCCTCGAGTTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCCGGAGGG 1982
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685
| | || |||||| |||| || |||| |||| | | ||||| |||| ||
Sbjct 1981 ATACCTTCTTTGTCCTGGATC-TTGGCTTTCACGTTGTCGATGGTGTCTGAGCTC---TC 1926
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| | || || |||||||| ||||| || || ||||| ||||||||
Sbjct 1925 AACCTCGAGGGTAATGGTTTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 1875
>seq210337
Length=1863
Score = 118 bits (130), Expect = 1e-21
Identities = 166/232 (72%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||| ||||| | | |||||| | || | || |||||| ||||||||||||||||
Sbjct 584 TTCCTCCACGAAGACGCAACACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAATCGG 643
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
|||| || || | || || ||||||||||| || || || | | ||||| |||| ||
Sbjct 644 CCAAAGTCCGACCATCCTCGAGCTGCTTACCAGCGAAGATAAGTCTTTGCTGATCCGGAG 703
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATT 35684
| | | ||||||||| |||||| ||||| | | | | |||||| |||| |
Sbjct 704 GGATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTGTCAATCGTGTCTGAGCTC---T 760
Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||||| | || || |||||||| || | || ||||| || ||||||||
Sbjct 761 CCACCTCAAGAGTAATGGTTTTACCGGTAAGGGTCTTCACGAAAATCTGCAT 812
Score = 100 bits (110), Expect = 3e-16
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | ||| | ||| | ||| |||||| || |||||||| || |||
Sbjct 814 CCACCACGAAGACGAAGCACAAGATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCTGCC 873
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || | || || | ||||||||| ||||| || | | ||||||||||| ||
Sbjct 874 AGGGTGCGTCCATCTTCTAACTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGTGGG 933
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686
| | ||| |||||| |||||| || | | | | | ||||| |||| |||
Sbjct 934 ATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATTATCAATGGTGTCTGAGCTC---TCC 990
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||||| ||||| ||||| || || | || || ||||| ||||||||
Sbjct 991 ACCTCCAAAGTGATGGTTTTTCCGGTAAGGGTCTTGACAAAGATCTGCAT 1040
Score = 82.4 bits (90), Expect = 7e-11
Identities = 146/212 (69%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587
||||| |||| || ||| ||||| ||||||||||| || | || || | || ||
Sbjct 1060 ACCAAGTGTAGAGTGGACTCTTTTTGGATGTTGTAATCCGCAAGAGTACGTCCATCTTCA 1119
Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647
|| |||||||| ||||| || | | |||||| |||| ||| | | || |||||| |
Sbjct 1120 AGTTGCTTACCGGCAAAGATAAGTCTCTGCTGATCCGGAGGGATACCTTCTTTGTCCTGG 1179
Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTT 35704
||||| ||| | | | | | ||| || |||| || ||||| | || || |||
Sbjct 1180 ATCTTAGCCTTGACATTATCGATCGTATCGGAGCTC---TCAACCTCAAGAGTAATGGTT 1236
Query 35705 TTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || || | ||| || ||||| || |||||
Sbjct 1237 TTCCCAGTGAGAGTCTTGACAAAGATTTGCAT 1268
>seq78792
Length=14290
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568
||| || | ||| | || || ||||| | ||| ||||| || ||||||||||||||
Sbjct 11670 TCCTCCTCTTAATCGCAGAACTAAATGAAGCGTCGATTCCTTCTGGATGTTGTAATCGGC 11611
Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628
| |||| |||| |||| || || || ||||| ||||| || |||||||||| ||
Sbjct 11610 GAGTGTTCTTCCGTCTTCCAATTGTTTTCCGGCAAAGATCAAACGTTGCTGGTCCGGTGG 11551
Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
|| | |||||||| |||||| |||| | | | | ||||| ||||| ||
Sbjct 11550 AATTCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATTGTGTCCGAAGATTCAAC 11491
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737
||| | || || || || ||||| | |||||||| || |||||||||
Sbjct 11490 CTCTAGGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATT 11442
>seq26664
Length=6282
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | ||| | ||| | ||| ||||| || |||||||| |||||
Sbjct 5646 CCACCACGGAGACGAAGCACGAGATGAAGCGTTGATTCCTTCTGGATGTTGTAGTCGGCG 5705
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || |||| || || || || ||||| || ||||| ||||||||||||| ||
Sbjct 5706 AGAGTACGTCCGTCTTCGAGTTGTTTTCCCGCGAAGATCAATCGCTGCTGGTCCGGTGGG 5765
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | |||||||| |||||| || | | | | | || ||| ||||| |||
Sbjct 5766 ATTCCTTCCTTGTCTTGGATCTTCGCTTTGACATTGTCGATGGTATCGGATGATTCGACC 5825
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | || ||||| || || || | |||||||| || ||||||||
Sbjct 5826 TCGAGAGTTATCGTCTTCCCGGTTAGGGTTTTCACGAAGATCTGCAT 5872
>seq224638
Length=5969
Score = 93.3 bits (102), Expect = 4e-14
Identities = 139/195 (71%), Gaps = 7/195 (4%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || |||||||||||||| || || || || | || || ||||| || ||||||||
Sbjct 3358 CTCTTTCTGAATGTTGTAATCCGCTAATGTCCGACCATCTTCGAGCTGTTTTCCCGCAAA 3417
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||||||||||| ||| | || || || || ||||| ||||| | |
Sbjct 3418 GATTAGCCTCTGCTGGTCCGGAGGGATCCTTTCTTTATCTTGAATCTTCGCCTTCACATT 3477
Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721
| | ||| || ||| ||| ||||| | |||||||| || ||||||||||| ||
Sbjct 3478 GTCAATCGTATCCGAGCT---TTCGACCTCAAGAGTGATCGTCTTTCCCGTCAAAGTCTT 3534
Query 35722 CACAAATATCTGCAT 35736
| |||||||||
Sbjct 3535 GGC-GTTATCTGCAT 3548
>seq117562
Length=2070
Score = 91.5 bits (100), Expect = 1e-13
Identities = 160/232 (69%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||||||||| | | |||||| | || | ||| |||||| ||||| ||||| || |
Sbjct 1687 TTCCACCACGAAGGCGCAACACAAGGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCCG 1628
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
| | || || | || || ||||||||||| || || || | | |||||| |||| ||
Sbjct 1627 CAAGCGTACGACCATCCTCGAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGATCCGGAG 1568
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATT 35684
||| | |||||||| |||||| ||| | | | | | ||||| |||| |
Sbjct 1567 GAATCCCTTCCTTGTCTTGGATCTTAGCCTTGACATTGTCTATTGTGTCTGAGCTC---T 1511
Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| || || | || || ||||| || || | || ||||| |||||||||||
Sbjct 1510 CAACTTCTAGAGTAATGGTTTTCCCGGTGAGGGTCTTCACGAATATCTGCAT 1459
>seq50902
Length=6384
Score = 91.5 bits (100), Expect = 1e-13
Identities = 138/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || ||||||||||| || || || || || | || || ||||| || ||||||||
Sbjct 4547 CTCTTTCTGAATGTTGTAGTCCGCTAATGTCCGACCATCTTCGAGCTGTTTTCCCGCAAA 4488
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||| ||||||| ||| | | || || || ||||| |||| | |
Sbjct 4487 GATTAGCCTCTGTTGGTCCGGAGGGATCCCTTCTTTATCTTGAATCTTCGTTTTCACATT 4428
Query 35665 TGCCACCGTGTCGCTCGA---TTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721
| | || || ||| ||| ||||| | ||||| ||||||||||||||||| ||
Sbjct 4427 GTCAATTGTATC---CGAGCTTTCGACCTCAAGAGTGATGGTTTTACCCGTCAAAGTCTT 4371
Query 35722 CACAAATATCTGCAT 35736
|| |||||||||||
Sbjct 4370 GACGAATATCTGCAT 4356
>seq167623
Length=7090
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||||||||| | || || |||| || || || || || || ||
Sbjct 2583 TCCTTCTGGATGTTGTAATCGGCGAGAGTACGGCCGTCTTCGAGTTGTTTTCCGGCGAAA 2524
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||| |||||||| |||| || | | |||||||| |||||| || | | |
Sbjct 2523 ATCAATCGCTGCTGATCCGGTGGGATTCCTTCCTTGTCTTGGATCTTCGCTTTGACATTG 2464
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | || ||| ||||| ||||| | || ||||| || || || | ||||||||
Sbjct 2463 TCGATGGTATCGGATGATTCGACCTCGAGAGTTATCGTCTTCCCGGTTAGGGTTTTCACG 2404
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 2403 AAGATCTGCAT 2393
>seq214945
Length=15579
Score = 82.4 bits (90), Expect = 7e-11
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||||||||| ||||||||||| ||||| || || | || |||||||| ||||| |||||
Sbjct 5523 CTCCTTTTGGATGTTGTAATCAGCCAAAGTACGACCATCTTCCAGCTGTTTACCGGCAAA 5582
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652
|||| | ||| ||||| ||||| || | || || || ||||||
Sbjct 5583 GATCAGTCTCTGTTGGTCTGAAGGGACTCCTTCTTTCTCTTGGATCTT 5630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449287791598240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |