Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_027119.1 Length=157498 Score E Sequences producing significant alignments: (Bits) Value seq249645 100 3e-16 >seq249645 Length=476466 Score = 100 bits (110), Expect = 3e-16 Identities = 272/406 (67%), Gaps = 8/406 (2%) Strand=Plus/Plus Query 60071 CTTCCAACACCTATTATGTCCGGCGTCCGCACCCCGACCCGACAGTTCAGCTCTTGTGTA 60130 || ||||| || || ||||| || || || || || | || ||||| ||||| || || Sbjct 264556 CTACCAACGCCAATCATGTCAGGTGTGCGTACGCCATCGCGTCAGTTTAGCTCGTGCGTC 264615 Query 60131 TTGATCAAAACTGGTGATACATTGGACTCAATTAATGCCACTGCGAAAAGCATCGTGGAT 60190 || ||| || |||||||| || ||||| || || ||||| | | |||||| Sbjct 264616 TTAATCGAATGTGGTGATAGCTTAGACTCTATCAACGCCACCACTAGCGCCATCGTACGC 264675 Query 60191 TATGTTTCCAAACGTGCTGGCATCGGATTCGATGTTGGGGCAATTCGTGGCATCGGTAGC 60250 ||||| || | |||||||| ||||| || | | || || |||| | | |||||| Sbjct 264676 TATGTGTCACAGCGTGCTGGTATCGGCATCAACGCAGGTCGTATCCGTGCCCTTGGTAGC 264735 Query 60251 CCTATCCGTAAAGGGGAAATGGTCCATACAGGTCTG-GTTCC-ATTCATCAAGTATTTGA 60308 ||||||||| || ||| ||||| || ||| |||| || || || | || | Sbjct 264736 CCTATCCGTGGCGGTGAAGCACAGCATACTGG-CTGTATTCCTTTTTATAAATTGTTCCA 264794 Query 60309 CTGGTGCCCTGAAGTCTTGCTCTCAAGGCGGTATCCGTGGTGGATCGGCAACATGCTATG 60368 | ||| | || | ||||| ||||| || | ||||| || | || || | | | Sbjct 264795 AACG-GCCGTTAAATGCTGCTCACAAGGTGGCGTACGTGGCGGTGCTGCGACGTTGT-TC 264852 Query 60369 TTCCCA-TCTGGCATTATCAATTTGA-TGATGTCGTTGTTCTCAAAAACAACCGTGGATT 60426 | |||| | ||||||| || |||| | || | | || |||||||| ||||| || | Sbjct 264853 TACCCACTATGGCATTTAGAAGTTGAGTCAT-TACTGGTACTCAAAAATAACCGCGGTGT 264911 Query 60427 GGAAGAGAACCGTGAACGCCGTATCGACTATGGGATTCAGATTAAC 60472 ||||| ||||||| || | ||| ||||| || | ||| | ||| Sbjct 264912 TGAAGACAACCGTGTCCGTCATATGGACTACGGCGTACAGTTAAAC 264957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 502182512543040