Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_027125.1 Length=47142 Score E Sequences producing significant alignments: (Bits) Value seq261214 131 5e-26 >seq261214 Length=278 Score = 131 bits (144), Expect = 5e-26 Identities = 173/238 (73%), Gaps = 9/238 (4%) Strand=Plus/Plus Query 38618 ACTTCATTATTTTACGGTTGGAAACATTTATTGTACGTTCCTGATATTGGAAGTAAA--- 38674 ||||| |||||||| ||||||||||||||||| || ||||||||| |||| |||| Sbjct 1 ACTTCTTTATTTTATGGTTGGAAACATTTATTATATGTTCCTGATGTTGGTGATAAAAAT 60 Query 38675 GAAGATATGATTTCTTTAGTTATTCATAAAATAACTGGTAAAACATTTGATAAGCGTTA- 38733 |||| | || |||| ||||||||| || | |||||||||||||| || | || Sbjct 61 GAAGTTTTGGCAATTTTA---ATTCATAAAGTATCAGGTAAAACATTTGACAAAAGATAT 117 Query 38734 --TAAGTCAAATTACATTGAAGAAAGTGATATTAGTAAAAATATTGATTGGGTTTTAGAG 38791 ||| || ||||| ||| ||| || || || || | |||||| |||| | Sbjct 118 GCTAATTCTAATTATATTTCGGAACAAGAAGTTGATAGGCATTTAGATTGGATTTTGCAT 177 Query 38792 CATTTTAGAATTTTGCATAAAACCGATGAAAAAGCTAAATTAACACCTTATCAGTTTT 38849 ||||||||||| ||| ||| ||| ||||| ||||||||||||||| |||||| Sbjct 178 CATTTTAGAATATTGACAAAAGTTGATTTAAAAGAAAAATTAACACCTTATGAGTTTT 235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150254474706944