Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_027340.1 Length=162160 Score E Sequences producing significant alignments: (Bits) Value seq249645 102 8e-17 >seq249645 Length=476466 Score = 102 bits (112), Expect = 8e-17 Identities = 268/404 (66%), Gaps = 4/404 (1%) Strand=Plus/Minus Query 58355 GTTGATCTGAACACCGTAGTCAGTACGGCGCTCGCGGTTGTTCTCAATACCACGGTTGTT 58414 ||| | ||| || |||||||| || | || | ||||||| |||| ||| ||||| || Sbjct 264957 GTTTAACTGTACGCCGTAGTCCATATGACGGACACGGTTGTCTTCAACACCGCGGTTATT 264898 Query 58415 CTTCAGCACGA-TCATGTCATCGAACTGGAAGTGCCACATCGGGTAATACATGGTTGCTG 58473 || || || | | ||| | || | | || ||||| | ||||| ||| || || | Sbjct 264897 TTTGAGTACCAGTAATGAC-TCAACTTCTAAATGCCATAGTGGGTAGAACAACGTCGCAG 264839 Query 58474 AGCCGCCACGGATACCACCCTGAGAACAGCTCTTCAGATCACCAACGAACTTCTTGATGA 58533 |||||||| | ||||| || || |||| || | | |||| || | Sbjct 264838 CACCGCCACGTACGCCACCTTGTGAGCAGCATTTAACGGCCGTTTGGAACAATTTATAAA 264779 Query 58534 ACGGGATCGTACCGGTATGA-GTCATCTCACCGTCGCGGATAGAGGAACCCAGGGCACGG 58592 | || || || ||||| || | |||||| | ||||||| | ||| ||||||||| Sbjct 264778 AAGGAATACAGCCAGTATGCTGTGCT-TCACCGCCACGGATAGGGCTACCAAGGGCACGG 264720 Query 58593 ATAGCGCCGAAGTCAACACCGATACCAGCACGCTTAGACACGTATTTCACGATTGCGGTG 58652 ||| || || | |||||||||||||||| ||||| || ||||| ||| | Sbjct 264719 ATACGACCTGCGTTGATGCCGATACCAGCACGCTGTGACACATAGCGTACGATGGCGCTA 264660 Query 58653 CCAGTAGCAGTAATGCTGTCCAGGGTGTCACCAGACTTGATCAGGACACATGAGCTGAAC 58712 || || | || ||| | | | |||||| | | ||| | ||| || ||||| ||| Sbjct 264659 GTGGTGGCGTTGATAGAGTCTAAGCTATCACCACATTCGATTAAGACGCACGAGCTAAAC 264600 Query 58713 TGACGGGTACGGGTACGCACGCCTGCCATGATAGGTGTTGGGAG 58756 ||||| | | |||||||| |||| |||||| || ||||| || Sbjct 264599 TGACGCGATGGCGTACGCACACCTGACATGATTGGCGTTGGTAG 264556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517051079865600