Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_027340.1
Length=162160
Score E
Sequences producing significant alignments: (Bits) Value
seq249645 102 8e-17
>seq249645
Length=476466
Score = 102 bits (112), Expect = 8e-17
Identities = 268/404 (66%), Gaps = 4/404 (1%)
Strand=Plus/Minus
Query 58355 GTTGATCTGAACACCGTAGTCAGTACGGCGCTCGCGGTTGTTCTCAATACCACGGTTGTT 58414
||| | ||| || |||||||| || | || | ||||||| |||| ||| ||||| ||
Sbjct 264957 GTTTAACTGTACGCCGTAGTCCATATGACGGACACGGTTGTCTTCAACACCGCGGTTATT 264898
Query 58415 CTTCAGCACGA-TCATGTCATCGAACTGGAAGTGCCACATCGGGTAATACATGGTTGCTG 58473
|| || || | | ||| | || | | || ||||| | ||||| ||| || || |
Sbjct 264897 TTTGAGTACCAGTAATGAC-TCAACTTCTAAATGCCATAGTGGGTAGAACAACGTCGCAG 264839
Query 58474 AGCCGCCACGGATACCACCCTGAGAACAGCTCTTCAGATCACCAACGAACTTCTTGATGA 58533
|||||||| | ||||| || || |||| || | | |||| || |
Sbjct 264838 CACCGCCACGTACGCCACCTTGTGAGCAGCATTTAACGGCCGTTTGGAACAATTTATAAA 264779
Query 58534 ACGGGATCGTACCGGTATGA-GTCATCTCACCGTCGCGGATAGAGGAACCCAGGGCACGG 58592
| || || || ||||| || | |||||| | ||||||| | ||| |||||||||
Sbjct 264778 AAGGAATACAGCCAGTATGCTGTGCT-TCACCGCCACGGATAGGGCTACCAAGGGCACGG 264720
Query 58593 ATAGCGCCGAAGTCAACACCGATACCAGCACGCTTAGACACGTATTTCACGATTGCGGTG 58652
||| || || | |||||||||||||||| ||||| || ||||| ||| |
Sbjct 264719 ATACGACCTGCGTTGATGCCGATACCAGCACGCTGTGACACATAGCGTACGATGGCGCTA 264660
Query 58653 CCAGTAGCAGTAATGCTGTCCAGGGTGTCACCAGACTTGATCAGGACACATGAGCTGAAC 58712
|| || | || ||| | | | |||||| | | ||| | ||| || ||||| |||
Sbjct 264659 GTGGTGGCGTTGATAGAGTCTAAGCTATCACCACATTCGATTAAGACGCACGAGCTAAAC 264600
Query 58713 TGACGGGTACGGGTACGCACGCCTGCCATGATAGGTGTTGGGAG 58756
||||| | | |||||||| |||| |||||| || ||||| ||
Sbjct 264599 TGACGCGATGGCGTACGCACACCTGACATGATTGGCGTTGGTAG 264556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517051079865600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |