Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_027351.1
Length=147745
Score E
Sequences producing significant alignments: (Bits) Value
seq158858 89.7 5e-13
>seq158858
Length=235449
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/226 (69%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 142255 TTTGTGGGAAATCTTTGGTGGAGAAGTTAACTCCAAAGGG-TACAAAGTTCTTGATAGTC 142313
||| ||||| |||||||||||| | || ||| ||||| || ||| | | |||| ||
Sbjct 214617 TTTATGGGATATCTTTGGTGGAACAATT-ACTGAGAAGGGTTATAAACTATTAGATACTC 214675
Query 142314 ATGTCGGCCTGATCTACGGTGACTCTATCACTGTTGCTCGTGCAAAAGATATCTTTGAAC 142373
|| | || ||||| ||||||||||| ||| ||| |||||||||| ||| ||||
Sbjct 214676 ATATTGGTGCAATCTATGGTGACTCTATTACTCTTGAGCGTGCAAAAGCTATTGTTGAGA 214735
Query 142374 GACTGAAAGATCGTGGCTTTGCATCGAGTAACATCGTGTACGGTGTTGGTTCTTACACAA 142433
| |||| |||||||| || | ||| | || | ||| || || ||||| ||
Sbjct 214736 AGTTAGAAGAAAAAGGCTTTGCTTCAACAAACGTTGTTTTCGGCGTGGGATCTTATACTT 214795
Query 142434 CCCAGTACACAACTCGTGATTCACTGGGTATGGCTGTGAAAGCAAC 142479
||| || ||||| ||||| || || | ||| ||||||| ||
Sbjct 214796 TCCAATATCAGACTCGCGATTCTCTAGGGTTTGCTATGAAAGCTAC 214841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471077163530400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |