Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_027381.1 Length=68365 Score E Sequences producing significant alignments: (Bits) Value seq105368 102 4e-17 >seq105368 Length=120852 Score = 102 bits (112), Expect = 4e-17 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 8764 ACTATGCAGGTATGATTTTACCTCGTTCTGGGTTAGGGCATAAACATGGTATTGTGCTTG 8823 |||||||||| |||||||| || || || || || || |||||||||||||| || | | Sbjct 3360 ACTATGCAGGCATGATTTTGCCGCGCTCAGGTTTGGGTCATAAACATGGTATCGTCTTAG 3301 Query 8824 GAAATCTTACAGGTCTCATTGATAGTGATTATCAAGGGGAACTGATGGTAAGCCTCTGGA 8883 | ||||| || || |||||| |||||||| || || |||||||| || | |||| Sbjct 3300 GCAATCTGGTTGGGCTAATTGATGCCGATTATCAGGGCGAGCTGATGGTCAGTATTTGGA 3241 Query 8884 ATCGCTCTACAAAGCCTTTTACTATTAATCCAGGTGACCGTATTGCTCAGT 8934 ||||| | | | |||| | | ||||||| || ||||| || |||| Sbjct 3240 ATCGCAGTCAAGACGACTTTATTCTCAATCCAGCAGAACGTATGGCGCAGT 3190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 217931113807208