Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq54724 114 1e-20 seq26661 114 1e-20 seq153189 109 5e-19 seq117562 109 5e-19 seq210337 102 7e-17 seq214945 100 2e-16 seq50902 98.7 8e-16 seq253709 89.7 4e-13 seq91578 86.0 5e-12 >seq54724 Length=7877 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCA-TGTTGCGCTC 27091 ||||| ||||| || | ||||| ||||| ||||||||||||||| || ||| || | Sbjct 2089 CGCAACACCAAGTGAAGAGTAGACTCTTTCTGAATATTGTAGTCGGCCAGAGTTCTGC-C 2031 Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151 ||| ||||| || || ||||| | || | | ||| || ||||| || | ||| ||||| Sbjct 2030 GTCCTCGAGTTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCCGGAGGGATACCTTCTTT 1971 Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211 || ||||||| ||||| | | || | ||||||| | ||||| || || || || Sbjct 1970 GTCCTGGATCTTGGCTTTCACGTTGTCGATGGTGTCTGAGCTCTCAACCTCGAGGGTAAT 1911 Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | ||| || |||| || || |||||||| |||||| Sbjct 1910 GGTTTTACCGGTCAAGGTCTTGACAAAGATCTGCATA 1874 >seq26661 Length=2801 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| ||||| || | ||||| || || ||||| || |||||| || | || | Sbjct 2072 CGCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTATAGTCGGCCAGTGTACGGCCA 2013 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || |||||||| ||||| ||| | ||||||||||| || ||||| || | ||| ||||| Sbjct 2012 TCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCTTCTTTG 1953 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| ||||| | | || | ||||||| | || || || || || ||| Sbjct 1952 TCCTGAATCTTAGCTTTCACGTTGTCGATGGTGTCTGAGCTCTCCACCTCAAGGGTAATA 1893 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || || |||| || ||||| |||||||||||| Sbjct 1892 GTCTTACCAGTCAAGGTCTTCACGAAGATTTGCATA 1857 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || ||||| || || ||||| || || |||| | || ||| Sbjct 2294 ACCAAGTGGAGGGTCGACTCTTTCTGTATGTTGTAATCCGCCAGTGTGCGACCATCCTCG 2235 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||||||||| || | ||||||||||| || ||||| || | || || || || | Sbjct 2234 AGCTGTTTACCAGCAAAGATGAGACGCTGCTGGTCCGGTGGGATCCCTTCCTTGTCCTGG 2175 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| || | | || | ||||| | || ||||| || || |||| ||| Sbjct 2174 ATCTTGGCCTTGACATTGTCAATTGTGTCAGAACTCTCGACTTCCAGGGTGATAGTCTTG 2115 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || |||||||| || || |||||| Sbjct 2114 CCGGTTAGGGTTTTCACGAATATCTGCATA 2085 >seq153189 Length=17048 Score = 109 bits (120), Expect = 5e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTC 27091 || || ||||| || || || || || |||||||| ||||| || | || || |||| | Sbjct 14723 CGTAACACCAAGTGCAAAGTTGACTCCTTTTGAATGTTGTAATC-CGCAAGTGTGCGACC 14665 Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151 || |||||||||||||| ||| | ||||||||||| || ||||| || | || || || Sbjct 14664 ATCCTCGAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATCCCTTCCTT 14605 Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211 || ||||||| || | | | || | ||||||| | || || || || || || Sbjct 14604 GTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCCACCTCGAGGGTAAT 14545 Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || |||| ||||| || ||||| |||||| Sbjct 14544 AGTCTTACCAGTCAAGGTTTTGACGAAGATCTGCATA 14508 Score = 105 bits (116), Expect = 6e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTC 27091 || || ||||| || || || || || |||||||| ||||| || | || || |||| | Sbjct 14951 CGTAACACCAAGTGCAAAGTTGACTCCTTTTGAATGTTGTAATC-CGCAAGTGTGCGACC 14893 Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151 || |||||||||||||| ||| | ||||||||||| || ||||| || | || || || Sbjct 14892 ATCCTCGAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATCCCTTCCTT 14833 Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211 || ||||||| || | | | || | ||||| | | || ||||| || || || Sbjct 14832 GTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCGACTTCAAGGGTGAT 14773 Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | ||||| || ||||| || || || || |||||| Sbjct 14772 TGTCTTGCCAGTAAGAGTCTTGACGAAAATCTGCATA 14736 >seq117562 Length=2070 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GC 27078 ||| || || | || | ||||||||| | || || ||||| |||||||||||||| || Sbjct 1914 GCCACCACGAAGACGAAGTACCAAATGAAGAGTCGACTCTTTCTGAATATTGTAGTCTGC 1855 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | || ||| | |||||||| || |||||||| | || || | ||| |||||||| | Sbjct 1854 TAAGGT-GCGTCCATCTTCGAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGATCCGGAG 1796 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || || || ||||| || | | || | |||||| | | |||| Sbjct 1795 GGATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATAGTGTCCGAGCTCTCAA 1736 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || | || |||| ||||| |||| ||| ||||||||||||||||| Sbjct 1735 CCTCCAAGGTAATAGTCTTGCCTGTCAAAGTCTTCACAAAGATTTGCAT 1687 Score = 100 bits (110), Expect = 2e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTC 27091 ||||| || | || | ||||| || || |||||||||||||| | || | | || | Sbjct 1673 CGCAACACAAGGTGAAGGGTAGACTCCTTCTGAATATTGTAGTC-CGCAAGCGTACGACC 1615 Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151 || |||||||| ||||| ||| | ||||| | ||| |||||||| || | || || || Sbjct 1614 ATCCTCGAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGATCCGGAGGAATCCCTTCCTT 1555 Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211 || |||||| || | | |||| ||||||| | |||||||||||||| || Sbjct 1554 GTCTTGGATCTTAGCCTTGACATTGTCTATTGTGTCTGAGCTCTCAACTTCTAGAGTAAT 1495 Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | ||| || || || || ||||| || || |||||| Sbjct 1494 GGTTTTCCCGGTGAGGGTCTTCACGAATATCTGCATA 1458 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | ||| || | ||||| || || || || || || || || || ||||| | Sbjct 1229 CCACCTCTCAATCGGAGAACCAAGTGCAAGGTCGACTCCTTCTGGATGTTATAGTCAGCC 1170 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | ||||| ||||||||||||||| | || | || || |||||||| || Sbjct 1169 AAGGTACGGCCATCTTCTAGCTGTTTACCGGCGAAGATCAATCGTTGCTGATCCGGAGGA 1110 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || |||||| || | | | || | ||||| | | || || Sbjct 1109 ATCCCTTCCTTGTCCTGGATCTTTGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCGACC 1050 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||||||| | || || || ||||||||||| || |||||||| Sbjct 1049 TCGAGAGTTATGGTCTTTCCAGTGAGAGTTTTCACGAATATTTGCAT 1003 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 27091 CGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTT 27150 ||||||| ||||| ||||||||| | || || | || |||||||| || | ||| || | Sbjct 1387 CGTCTTCAAGCTGCTTACCGGCGAAGATAAGTCTTTGCTGATCCGGAGGAATACCTTCCT 1328 Query 27151 TATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTA 27210 | || |||||| ||| | | | || | ||| |||| | ||| ||||| || || | Sbjct 1327 TGTCCTGGATCTTAGCTTTGACGTTATCAATAGTATCTGAGCTTTCGACTTCGAGGGTAA 1268 Query 27211 TAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | | || || |||| ||| || || |||||||||||| Sbjct 1267 TGGTCTTTCCGGTCAAAGTCTTGACGAAGATTTGCATA 1230 >seq210337 Length=1863 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | || || ||||| ||||||||||| || || | || | || || Sbjct 376 ACCAAATGAAGAGTCGATTCTTTCTGAATATTGTAATCCGCCAAAGTCCGACCATCCTCA 435 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||||||||| ||| | ||||| | |||||| ||||| || | || ||||| || Sbjct 436 AGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCTTTGTCCTGA 495 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || || |||| | || | |||||| | | ||||| || | || |||| ||| Sbjct 496 ATTTTAGCCTTCACATTATCAATAGTGTCCGAGCTCTCAACCTCCAAGGTAATAGTCTTG 555 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||| ||| ||||||||||||||||| Sbjct 556 CCTGTCAAAGTCTTCACAAAGATTTGCAT 584 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTT 27096 |||||| |||| || || |||||||| || ||||| || | || | | || | |||| Sbjct 1059 TACCAAGTGTAGAGTGGACTCTTTTTGGATGTTGTAATC-CGCAAGAGTACGTCCATCTT 1117 Query 27097 CGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGG 27156 | || || |||||||| | || || | ||| |||||||| || | ||| ||||| || Sbjct 1118 CAAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGATCCGGAGGGATACCTTCTTTGTCCT 1177 Query 27157 CGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATT 27216 |||||| || | | || | || || | | ||||| || ||||| || | || Sbjct 1178 GGATCTTAGCCTTGACATTATCGATCGTATCGGAGCTCTCAACCTCAAGAGTAATGGTTT 1237 Query 27217 TGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || || ||||| || ||||||||||||||| Sbjct 1238 TCCCAGTGAGAGTCTTGACAAAGATTTGCATA 1269 >seq214945 Length=15579 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| || | || | || || || ||||| |||||||| ||| || | || || Sbjct 7775 CGCAACACAAGGTGAAGTGTTGATTCCTTTTGGATATTGTAATCGGCCAAAGTACGGCCG 7834 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || ||||||||||||||||| | || || | |||| || | || || || ||||| Sbjct 7835 TCCTCGAGCTGTTTACCGGCAAAGATCAGGCTTTGTTTGTCAGAAGGGACTCCTTCTTTC 7894 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| || | | ||||||| ||||| | | ||| || || || | ||| Sbjct 7895 TCTTGGATCTTGGCCTTGACGTTTTCTACGGTGTCCGAGCTTTCGACCTCGAGGGATATG 7954 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||| || ||||| || || ||||||||||| Sbjct 7955 GTCTTGCCTGTAAGAGTCTTTACGAAGATTTGCAT 7989 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | |||| | ||||| || | | || || ||||| || ||||| || | Sbjct 5488 CCTCCTCTTAACCTGAGAACCAAGTGGAGAGCTGACTCCTTTTGGATGTTGTAATCAGCC 5547 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | ||||| |||||||||||||| | || || | |||||| || | || Sbjct 5548 AAAGTACGACCATCTTCCAGCTGTTTACCGGCAAAGATCAGTCTCTGTTGGTCTGAAGGG 5607 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 || || ||||| || ||||||| || | | ||||||| ||||| | | ||| || Sbjct 5608 ACTCCTTCTTTCTCTTGGATCTTGGCCTTGACGTTTTCTACTGTGTCCGAGCTTTCGACC 5667 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGC 27250 || || | ||| | ||||| | ||||| || || ||||||||||| || Sbjct 5668 TCGAGGGATATGGTCTTGCCTTTAAGAGTCTTTACGAAGATTTGCATCGC 5717 Score = 84.2 bits (92), Expect = 2e-11 Identities = 161/234 (69%), Gaps = 5/234 (2%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 ||||| | |||| | ||||| || | || || || ||||| || ||||| || ||| Sbjct 3472 CCTCCTCTTAACCTGAGAACCAAGTGGAGAGTTGATTCCTTTTGGATGTTGTAATCAGCT 3531 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | || || | |||||||||||||||||||| | || || | ||||| || | || Sbjct 3532 AAAGTACGGC-CATCTTCGAGCTGTTTACCGGCAAAGATCAGTCTTTGTTGGTCTGAAGG 3590 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 || || ||||| | |||||| || | | |||| || ||||| | | |||||| Sbjct 3591 GACTCCTTCTTTCTTTTGGATCTTCAACTTGACGTTTTCGACCGTGTCGGAGCTTTCAAC 3650 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTC---ACAAAGATTTGCATAGC 27250 ||| || | ||| | || | ||| ||||| || || ||||||||||| || Sbjct 3651 TTCAAGGGATATGGTCTTTCTCGTAAGAGTGATCATTACGAAGATTTGCATCGC 3704 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 || || ||||| |||||| |||| || ||| | || || | ||||| ||||||||||| Sbjct 7565 GTTGACTCTTTCTGAATACTGTAATCAGCTAAAGTC-CGACCATCTTCTAGCTGTTTACC 7623 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 ||| | || || | |||||| || || || | || ||||| || ||||| || Sbjct 7624 GGCAAAGATTAGCCTCTGTTGGTCAGGTGGAATCCCTTCTTTGTCTTGTATCTTCGCCTT 7683 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 || | | || | || || | | || || || ||||| || | || ||||||| ||| Sbjct 7684 CACGTTATCAATCGTATCCGAGCTCTCTACCTCAAGAGTAATGGTCTTCCCCGTCAAAGT 7743 Query 27230 TTTCACAAAGATTTGCAT 27247 || |||||||||||||| Sbjct 7744 CTTGACAAAGATTTGCAT 7761 >seq50902 Length=6384 Score = 98.7 bits (108), Expect = 8e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 || || ||||| ||||| |||||||| ||| |||| || | |||||||||||||| || Sbjct 4552 GTGGACTCTTTCTGAATGTTGTAGTCCGCTAATGTC-CGACCATCTTCGAGCTGTTTTCC 4494 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 || | || || | |||||| ||||| || | || |||||||| ||||| |||| Sbjct 4493 CGCAAAGATTAGCCTCTGTTGGTCCGGAGGGATCCCTTCTTTATCTTGAATCTTCGTTTT 4434 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 || | || | || || | | ||| || || ||||| || | ||| ||||||| ||| Sbjct 4433 CACATTGTCAATTGTATCCGAGCTTTCGACCTCAAGAGTGATGGTTTTACCCGTCAAAGT 4374 Query 27230 TTTCACAAAGATTTGCAT 27247 || || || || ||||| Sbjct 4373 CTTGACGAATATCTGCAT 4356 >seq253709 Length=6257 Score = 89.7 bits (98), Expect = 4e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 ||||| || | || || || ||||||| ||||| || ||| | || || | ||||| Sbjct 5348 ACCAAGTGGAGAGTTGATTCCATTTGAATGTTGTAATCAGCTAAAGTA-CGACCATCTTC 5290 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||||||||||||||| | || || | ||||| || | || || | ||||| || Sbjct 5289 GAGCTGTTTACCGGCAAAGATCAGTCTTTGTTGGTCTGAAGGGACTTCTTCTTTCTCTTG 5230 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 |||||| || | | |||| || ||||| | | ||||||||| || | ||| | || Sbjct 5229 GATCTTCAACTTGACGTTTTCGACCGTGTCGGAGTTTTCAACTTCAAGGGATATGGTCTT 5170 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATAGC 27250 ||| ||||| |||| ||||||||||| || Sbjct 5169 TAACGTAAGAGTCATCACGAAGATTTGCATTGC 5137 >seq91578 Length=16840 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| | | || |||||||||| ||||| ||| Sbjct 272 GTTGATTCCTTCTGGATGTTGTAGTCGGCGAGAGTACGTCCGTCTTCGAGTTGTTTTCCG 331 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| |||| | || ||||||||||| || | || || || || |||||| || Sbjct 332 GCGAAAATCAATCGTTGTTGATCCGGTGGGATTCCTTCCTTGTCTTGGATCTTAGCCTTG 391 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | || || | | |||||| || || ||||| | || ||||| || ||| Sbjct 392 ACATTGTCGATCGTATCCGATGATTCAACCTCGAGCGTTATCGTCTTCCCCGTTAGGGTT 451 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||| ||||| Sbjct 452 TTCACGAAGATCTGCAT 468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423550456117536