Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq153189 145 7e-30
seq26661 138 1e-27
seq167623 134 1e-26
seq78792 127 2e-24
seq70799 122 8e-23
seq210337 118 9e-22
seq117562 118 9e-22
seq54724 113 4e-20
seq214945 107 2e-18
seq204555 107 2e-18
seq50902 104 2e-17
seq236154 102 7e-17
seq185166 84.2 2e-11
seq224638 82.4 7e-11
>seq153189
Length=17048
Score = 145 bits (160), Expect = 7e-30
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||| ||||| ||| | || || || || |||||| ||
Sbjct 14281 ATGCAGATCTTCGTTAAGACTCTCACCGGAAAGACAATCACCCTCGAGGTGGAAAGCTCG 14340
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| || | || ||| || || || ||||| ||||| || || || |||||
Sbjct 14341 GACACGATCGACAATGTTAAAGCCAAGATCCAGGACAAGGAAGGTATTCCTCCGGATCAG 14400
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | |||||| || ||||||||||| | ||| | |||| ||||||
Sbjct 14401 CAGAGATTGATCTTCGCCGGAAAGCAATTGGAAGATGGACGCACCTTGGCCGACTACAAC 14460
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||||||| | || ||||| |||||| | || ||||| ||
Sbjct 14461 ATTCAGAAGGAGTCGACCCTTCACTTGGTGTTGCGTCTTCGTGGTGGTAT 14510
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| |||| || ||| ||||||| || || ||||| ||
Sbjct 14509 ATGCAGATCTTCGTCAAAACCTTGACTGGTAAGACTATTACCCTCGAGGTGGAGAGCTCA 14568
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || || || ||||| ||||| || ||||| || ||
Sbjct 14569 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCACCGGACCAG 14628
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| || ||||| | || || || || || | |||||||||
Sbjct 14629 CAGCGTCTCATCTTCGCTGGTAAACAGCTCGAGGATGGTCGCACACTTGCGGATTACAAC 14688
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||||||||||| || || || ||||| || ||| | || ||||| ||
Sbjct 14689 ATTCAAAAGGAGTCAACTTTGCACTTGGTGTTACGTCTCCGTGGTGGTAT 14738
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||| || |||||| | || || |||||||| || ||
Sbjct 14737 ATGCAGATTTTCGTCAAGACTCTTACTGGCAAGACAATCACCCTTGAAGTCGAGAGCTCT 14796
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || || || ||||| ||||| || ||||| || ||
Sbjct 14797 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCACCGGACCAG 14856
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| || ||||| | || || || || || | |||||||||
Sbjct 14857 CAGCGTCTCATCTTCGCTGGTAAACAGCTCGAGGATGGTCGCACACTTGCGGATTACAAC 14916
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|||||||||||||| || || || ||||| || ||| | || |||||
Sbjct 14917 ATTCAAAAGGAGTCAACTTTGCACTTGGTGTTACGTCTCCGTGGTGG 14963
>seq26661
Length=2801
Score = 138 bits (152), Expect = 1e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || || |||| |||||| ||||||| || || || || ||
Sbjct 1629 CATGCAGATCTTTGTCAAGACCTTGACGGGCAAGACTATTACCCTCGAGGTCGAGAGCTC 1688
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||| | || ||| |||||| || ||||| ||||| || || || || ||
Sbjct 1689 AGACACCATTGATAACGTGAAAGCAAAAATCCAGGACAAGGAAGGTATCCCTCCGGACCA 1748
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | |||||| || ||| | |||||| || || | |||| |||||
Sbjct 1749 GCAGAGATTGATCTTCGCCGGAAAGCAACTTGAAGACGGTCGAACTCTAGCCGACTACAA 1808
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| ||||||||||| || | || ||||| |||||| | || ||||| ||
Sbjct 1809 CATCCAAAAGGAGTCAACTCTTCACTTGGTGTTGCGTCTTCGTGGTGGTAT 1859
Score = 122 bits (134), Expect = 8e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||| |||||| | |||||| | ||||| ||| ||
Sbjct 1402 ATGCAGATCTTTGTCAAGACCTTGACGGGCAAGACCATTACTTTGGAAGTTGAAAGCTCA 1461
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || ||| || || || ||||| ||||| || ||||| |||||
Sbjct 1462 GACACAATTGACAACGTGAAAGCCAAGATCCAGGACAAGGAAGGTATTCCACCGGATCAG 1521
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | |||||| || ||| | |||||| | ||| | | || ||||||
Sbjct 1522 CAGAGATTGATCTTCGCCGGAAAGCAACTTGAAGACGGCCGAACCTTGGCGGACTACAAC 1581
Query 27168 ATTCAAAAGGAGTCGAC 27184
||||| |||||||||||
Sbjct 1582 ATTCAGAAGGAGTCGAC 1598
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||||||||| || ||||| || ||||||||| |||| || || ||||| || ||
Sbjct 2086 ATGCAGATATTCGTGAAAACCCTAACCGGCAAGACTATCACCCTGGAAGTCGAGAGTTCT 2145
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || || || ||||| ||||| || ||||| || ||
Sbjct 2146 GACACAATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCACCGGACCAG 2205
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | || || ||||| | || || || || | | |||||||||
Sbjct 2206 CAGCGTCTCATCTTTGCTGGTAAACAGCTCGAGGATGGTCGCACACTGGCGGATTACAAC 2265
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || || ||||||||| | || ||||| | ||| | || |||||
Sbjct 2266 ATACAGAAAGAGTCGACCCTCCACTTGGTCCTCCGTCTCCGTGGTGG 2312
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || |||||||| ||||| ||| |||| || || || |||||| ||
Sbjct 946 ATGCAGATCTTCGTGAAAACTCTCACCGGAAAGACTATCACCCTCGAGGTGGAAAGTTCT 1005
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| || | || || ||| || || ||||| ||||| || || || |||||
Sbjct 1006 GACACGATCGACAACGTTAAGGCAAAGATCCAGGACAAGGAAGGTATTCCTCCGGATCAG 1065
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || || || ||||||||||| | ||| | | |||||||||
Sbjct 1066 CAGAGGCTTATCTTTGCTGGAAAGCAATTGGAAGATGGCCGTACCTTGGCGGATTACAAC 1125
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196
|| |||||||| || || | || |||||
Sbjct 1126 ATCCAAAAGGAATCAACGCTTCACTTGGT 1154
Score = 107 bits (118), Expect = 2e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| |||| |||||| | ||||| || || || || ||
Sbjct 1174 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACGATTACCCTCGAGGTTGAGAGTTCT 1233
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || || || ||||| ||||| || ||||| || ||
Sbjct 1234 GACACCATTGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGAATTCCACCGGACCAG 1293
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | |||||| || ||| | || ||| | || | |||| ||||||
Sbjct 1294 CAGAGGTTGATCTTCGCCGGAAAGCAACTCGAGGACGGCCGTACTCTCGCCGACTACAAC 1353
Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191
|| ||||||||||||||| | |||
Sbjct 1354 ATCCAAAAGGAGTCGACCCTTCAT 1377
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || |||| || ||| ||||||| ||||| ||||| ||
Sbjct 1858 ATGCAAATCTTCGTGAAGACCTTGACTGGTAAGACTATTACCCTTGAGGTGGAGAGCTCA 1917
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| || ||||| ||||||||||| || || || || ||
Sbjct 1918 GACACCATCGACAACGTGAAAGCTAAGATTCAGGACAAAGAAGGTATTCCTCCGGACCAG 1977
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| || || || | || || | || | |||| || |||
Sbjct 1978 CAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGTACACTGGCCGACTATAAC 2037
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| ||||| || || | || ||||| |||||| | || ||||| ||
Sbjct 2038 ATTCAGAAGGAATCTACTCTGCACTTGGTCTTGCGTCTCCGTGGTGGTAT 2087
>seq167623
Length=7090
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || ||||| ||| | || ||||| || || ||| | |||
Sbjct 2393 ATGCAGATCTTCGTGAAAACCCTAACCGGGAAGACGATAACTCTCGAGGTCGAATCATCC 2452
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | |||||| || || |||||||| ||||| || ||||| |||||
Sbjct 2453 GATACCATCGACAATGTCAAAGCGAAGATCCAAGACAAGGAAGGAATCCCACCGGATCAG 2512
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| || || | |||||| |||||| | |||||| | || | |||||||||||
Sbjct 2513 CAGCGATTGATTTTCGCCGGAAAACAACTCGAAGACGGCCGTACTCTCGCCGATTACAAC 2572
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || ||||| ||||| | ||| | || | ||| | || |||||
Sbjct 2573 ATCCAGAAGGAATCGACGCTTCATCTCGTCCTTCGTCTCCGTGGTGG 2619
>seq78792
Length=14290
Score = 127 bits (140), Expect = 2e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || ||| | || || || || || ||| | ||
Sbjct 11443 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACCCTAGAGGTTGAATCTTCG 11502
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| || || |||||||| ||||| || ||||| || ||
Sbjct 11503 GACACAATCGACAATGTGAAAGCGAAGATCCAAGACAAGGAAGGAATTCCACCGGACCAG 11562
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| || | ||||| ||||||||||||||| | || | |||||||||||
Sbjct 11563 CAACGTTTGATCTTTGCCGGAAAACAATTGGAAGACGGAAGAACACTCGCCGATTACAAC 11622
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTT 27205
|| || ||||| ||||| | ||||| ||| |||| ||
Sbjct 11623 ATCCAGAAGGAATCGACGCTTCATTTAGTTCTGCGATT 11660
>seq70799
Length=497
Score = 122 bits (134), Expect = 8e-23
Identities = 184/259 (71%), Gaps = 2/259 (1%)
Strand=Plus/Minus
Query 135506 GAAGGCAAAATGCACGGATTTATGCGCATGTATTGGGCAAAAAAGATATTGGAATGGTCT 135565
|||||||| |||||||| || | |||||||| ||||| ||||||||| |||||||| ||
Sbjct 270 GAAGGCAAGATGCACGGTTTCCTTCGCATGTACTGGGCTAAAAAGATACTGGAATGGACT 211
Query 135566 GCATCGCCTGC-AGAGGCGCTACAACACGCAATATTTTTTAATGATTACTACAGTTTAGA 135624
| | || | |||| | || | || || | | | ||||| | || || | ||
Sbjct 210 GATACTCCAGATAGAG-CACTGGCCGATGCCATTTATCTCAATGACAAGTATAGCATGGA 152
Query 135625 TGGACGCGATTCAAATGGCTACGTAGGTTGTATGTGGTCTATTTGCGGTGTACACGATCA 135684
|| ||||| ||| ||| | || || ||||||||||| || || ||| | || |||||
Sbjct 151 CGGTCGCGACCCAAGTGGTTTTGTTGGATGTATGTGGTCAATATGTGGTATTCATGATCA 92
Query 135685 AGGATGGAAGGAGCGCAAAGTGTTTGGCAAGATTCGCTATATGAACTATGACGGTTGTAC 135744
|| |||| || | || | ||||| || ||| | |||||||||||||| || || |
Sbjct 91 GGGGTGGAGAGAAAGAGAAATTTTTGGAAAAATTAGGTATATGAACTATGAAGGATGCAA 32
Query 135745 AAGAAAATTTAATGTAAAT 135763
||||| ||| | |||||
Sbjct 31 GAGAAAGTTTGACATAAAT 13
>seq210337
Length=1863
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| ||||| || ||||| || || || ||| | || ||||| || || || ||
Sbjct 1724 ATGCAAATATTCGTGAAAACGCTTACTGGAAAGACCATAACTCTCGAGGTCGAGAGCTCT 1665
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| ||| || || ||||| ||||| || || || |||||
Sbjct 1664 GACACCATCGACAACGTCAAGGCAAAGATCCAGGACAAGGAAGGGATTCCTCCGGATCAG 1605
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| || || || | |||||| |||||| | ||||| | ||| | | || || |||
Sbjct 1604 CAACGATTGATCTTCGCCGGTAAACAACTAGAAGATGGCCGTACCTTGGCTGACTATAAC 1545
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||||| || |||||| | || ||| | ||||| ||
Sbjct 1544 ATCCAGAAGGAGTCGACCTTGCACTTGGTTCTCCGATTGAGAGGTGGTAT 1495
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || ||| |||| |||||| ||||||| | || || || ||
Sbjct 584 ATGCAAATCTTTGTGAAGACTTTGACAGGCAAGACTATTACCTTGGAGGTTGAGAGCTCG 525
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || |||||||| ||||||||||| || || || || |||
Sbjct 524 GACACTATTGATAATGTGAAGGCTAAAATTCAGGACAAAGAAGGGATCCCTCCGGACCAA 465
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||| || ||||| | || || || ||| | | ||||||||
Sbjct 464 CAGAGACTCATCTTCGCTGGTAAACAGCTTGAGGATGGTCGGACTTTGGCGGATTACAAT 405
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| || || ||||| | ||||||||| | ||| | || |||||
Sbjct 404 ATTCAGAAAGAATCGACTCTTCATTTGGTTCTTCGTCTTCGTGGTGG 358
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || ||||| || | ||||||||||| ||||| ||
Sbjct 812 ATGCAGATTTTCGTGAAGACCCTTACCGGTAAAACCATTACTCTTGAGGTGGAGAGCTCA 753
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| ||||||| | || || || || || ||||| ||||| || || || |||||
Sbjct 752 GACACGATTGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTCCGGATCAG 693
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | || | ||| || || || | || || || ||| | |||||||||||
Sbjct 692 CAAAGACTTATCTTCGCTGGTAAGCAGCTCGAGGATGGTCGGACTTTGGCCGATTACAAC 633
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||| ||| | || | || |||||| | || || || ||
Sbjct 632 ATTCAGAAGGAGTCAACCCTTCACCTTGTGTTGCGTCTTCGTGGAGGAAT 583
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || ||||| || || || | ||||||||||| || || |||
Sbjct 1268 ATGCAAATCTTTGTCAAGACTCTCACTGGGAAAACCATTACTCTTGAGGTTGAGAGCTCC 1209
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| |||| || | ||||| || || || ||||||||||| || || || |||||
Sbjct 1208 GATACGATCGATAATGTCAAGGCTAAGATCCAGGACAAAGAAGGTATCCCTCCGGATCAG 1149
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||||| || ||| | ||||| | || || | |||||||||
Sbjct 1148 CAGAGACTTATCTTTGCCGGTAAGCAACTTGAAGATGGACGTACTCTTGCGGATTACAAC 1089
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||| ||||| || |||| ||||| | ||| | | ||||| ||
Sbjct 1088 ATCCAAAAAGAGTCCACTCTACACTTGGTACTTCGTCTCAGAGGTGGTAT 1039
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||||||||||| ||| | || |||||||| || || ||
Sbjct 1496 ATGCAGATCTTTGTCAAGACTCTGACCGGAAAGACCATCACTCTTGAGGTTGAGAGCTCA 1437
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | ||||| || || || ||||| ||||| || || || |||||
Sbjct 1436 GATACTATTGATAACGTCAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTCCGGATCAG 1377
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | || | |||||| || || | ||||| | ||| | | ||||||||
Sbjct 1376 CAAAGACTTATCTTCGCCGGTAAGCAGCTTGAAGATGGAAGGACTCTGGCTGATTACAAT 1317
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || ||||| || | || | || |||||| | || ||||| ||
Sbjct 1316 ATCCAGAAAGAGTCCACTCTCCACCTTGTGTTGCGTCTTCGTGGTGGTAT 1267
>seq117562
Length=2070
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| ||||| || |||||||| || || ||| | || ||||| || || || ||
Sbjct 1003 ATGCAAATATTCGTGAAAACTCTCACTGGAAAGACCATAACTCTCGAGGTCGAGAGCTCT 1062
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| ||| || || ||||| ||||| || || || |||||
Sbjct 1063 GACACCATCGACAACGTCAAGGCAAAGATCCAGGACAAGGAAGGGATTCCTCCGGATCAG 1122
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| || || || | |||||| ||||| | ||||| | ||| | | || || |||
Sbjct 1123 CAACGATTGATCTTCGCCGGTAAACAGCTAGAAGATGGCCGTACCTTGGCTGACTATAAC 1182
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||||| || |||||| | || ||| | ||||| ||
Sbjct 1183 ATCCAGAAGGAGTCGACCTTGCACTTGGTTCTCCGATTGAGAGGTGGTAT 1232
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || ||| ||||||| ||| | ||||| || ||||| ||| ||
Sbjct 1231 ATGCAAATCTTCGTCAAGACTTTGACCGGAAAGACCATTACCCTCGAAGTCGAAAGCTCA 1290
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | |||||| || || || ||||| ||||| || || || |||||
Sbjct 1291 GATACTATTGATAACGTCAAAGCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGATCAG 1350
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | || | |||||| || || | |||||| | ||| | | |||||||||
Sbjct 1351 CAAAGACTTATCTTCGCCGGTAAGCAGCTTGAAGACGGAAGGACTCTGGCGGATTACAAC 1410
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| || | ||| | || | ||| | | ||||| ||
Sbjct 1411 ATCCAGAAGGAGTCTACACTCCATCTTGTGCTTCGTCTCAGAGGTGGTAT 1460
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||||||||| || || || || ||||| || | |||||||| ||||| || ||
Sbjct 1459 ATGCAGATATTCGTGAAGACCCTCACCGGGAAAACCATTACTCTAGAAGTTGAGAGCTCA 1518
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || |||||||| ||||| || || || |||||
Sbjct 1519 GACACAATAGACAATGTCAAGGCTAAGATCCAAGACAAGGAAGGGATTCCTCCGGATCAG 1578
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||| || || || | || || || || || | || |||||
Sbjct 1579 CAGAGACTCATCTTCGCTGGTAAGCAGCTCGAGGATGGTCGTACGCTTGCGGACTACAAT 1638
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||| ||| | || | || ||||| | || ||||| ||
Sbjct 1639 ATTCAGAAGGAGTCTACCCTTCACCTTGTGTTGCGCCTTCGTGGTGGAAT 1688
>seq54724
Length=7877
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| |||||||| ||||| ||| |||| || || || |||||| ||
Sbjct 1419 ATGCAGATCTTTGTGAAAACTCTCACCGGAAAGACTATCACCCTCGAGGTGGAAAGTTCT 1478
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| |||| || | || || || ||||| || || ||||| || || || |||||
Sbjct 1479 GATACGATCGACAACGTTAAGGCTAAGATTCAGGATAAGGAAGGAATTCCTCCGGATCAG 1538
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | |||||| || || |||||||| | ||| | | |||||||||
Sbjct 1539 CAGAGATTGATCTTCGCCGGAAAGCAGTTGGAAGATGGCCGTACCTTGGCGGATTACAAC 1598
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197
|| || ||||| || || | || ||||||
Sbjct 1599 ATCCAGAAGGAATCCACGCTTCACTTGGTT 1628
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||| || || ||||||| || || || || ||
Sbjct 1647 ATGCAGATCTTTGTTAAGACCTTGACTGGTAAAACTATTACCCTCGAGGTTGAGAGTTCT 1706
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || ||||| || ||||| || || || |||||
Sbjct 1707 GACACCATCGACAACGTCAAGGCTAAGATCCAAGATAAGGAAGGAATTCCTCCGGATCAG 1766
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | ||||| | |||||| || ||| | || ||| || || || | || ||||||
Sbjct 1767 CAGAGATTAATCTTCGCCGGAAAGCAACTTGAGGACGGTCGTACTCTTGCTGACTACAAC 1826
Query 27168 ATTCAAAAGGAGTCGAC 27184
|| || |||||||||||
Sbjct 1827 ATCCAGAAGGAGTCGAC 1843
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || ||||||| || | ||||| || || || || ||
Sbjct 1875 ATGCAGATCTTTGTCAAGACCTTGACCGGTAAAACCATTACCCTCGAGGTTGAGAGCTCA 1934
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| || || || ||||||||||| || || || || ||
Sbjct 1935 GACACCATCGACAACGTGAAAGCCAAGATCCAGGACAAAGAAGGTATCCCTCCGGACCAG 1994
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | ||||| || ||| | || ||| | || | |||| |||||
Sbjct 1995 CAGAGATTGATCTTTGCCGGAAAGCAACTCGAGGACGGCAGAACTCTGGCCGACTACAAT 2054
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || ||||| || | || ||||| |||||| | || ||||| ||
Sbjct 2055 ATTCAGAAAGAGTCTACTCTTCACTTGGTGTTGCGTCTTCGTGGTGGTAT 2104
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || ||||||| || | ||||| ||||| || || ||
Sbjct 2103 ATGCAGATCTTTGTCAAGACCTTGACCGGTAAAACCATTACCCTTGAGGTCGAGAGCTCA 2162
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || || |||||||| || || || || || |||
Sbjct 2163 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAAGAGGGGATTCCTCCGGACCAA 2222
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | ||| || || || | || || || || | | || ||||||
Sbjct 2223 CAACGTCTCATCTTCGCTGGGAAGCAGCTTGAGGATGGTCGCACTTTGGCTGACTACAAC 2282
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || ||||||||||| | || ||||| | ||| | || |||||
Sbjct 2283 ATCCAGAAGGAGTCGACTCTCCACTTGGTCCTCCGTCTCCGTGGTGG 2329
>seq214945
Length=15579
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || ||| |||| || ||| | ||||||||||| || || ||
Sbjct 7761 ATGCAAATCTTTGTCAAGACTTTGACGGGGAAGACCATTACTCTTGAGGTAGAGAGCTCG 7702
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| ||||||| | || || || || |||||||||||||| || ||||| || |||
Sbjct 7701 GATACGATTGATAACGTGAAGGCGAAGATACAAGACAAAGAAGGGATTCCACCTGACCAA 7642
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | |||| | ||||| ||||| | ||||| || ||| | | |||||||
Sbjct 7641 CAGAGGCTAATCTTTGCCGGTAAACAGCTAGAAGATGGTCGGACTTTAGCTGATTACAGT 7582
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| || ||||| || | || | ||| | ||| | || |||||
Sbjct 7581 ATTCAGAAAGAGTCAACACTTCACCTTGTTCTTCGTCTCCGTGGTGG 7535
>seq204555
Length=10983
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||||||||| || || || || ||||| || | || ||| | ||||| || ||
Sbjct 1490 ATGCAGATATTCGTTAAGACCCTTACCGGTAAAACCATAACTTTGGAAGTTGAGAGCTCA 1431
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| ||||||| | || || ||| |||||||| |||||||| || ||||| || ||
Sbjct 1430 GACACGATTGACAATGTAAAGGCAAAGATTCAAGATAAAGAAGGGATCCCACCGGACCAG 1371
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | |||| | || || |||||| | ||||| || ||| | | || ||||||
Sbjct 1370 CAGAGGCTAATCTTTGCGGGGAAACAACTCGAAGATGGTCGGACATTAGCGGACTACAAC 1311
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| || ||||| || | || | ||| | ||| | || |||||
Sbjct 1310 ATTCAGAAAGAGTCAACTCTTCACCTTGTTCTCCGTCTCCGTGGTGG 1264
>seq50902
Length=6384
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||||||||| || || ||| |||| || || | || |||||||| || ||| ||
Sbjct 4356 ATGCAGATATTCGTCAAGACTTTGACGGGTAAAACCATCACTCTTGAGGTCGAAAGCTCG 4415
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || ||| || |||||||| |||||||| || || || || |||
Sbjct 4416 GATACAATTGACAATGTGAAAACGAAGATTCAAGATAAAGAAGGGATCCCTCCGGACCAA 4475
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | |||| | || || ||||| | ||||| || ||| | | || ||||||
Sbjct 4476 CAGAGGCTAATCTTTGCGGGAAAACAGCTCGAAGATGGTCGGACATTAGCGGACTACAAC 4535
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| || ||||| || | || | ||| | ||| | || |||||
Sbjct 4536 ATTCAGAAAGAGTCCACTCTTCACCTTGTTCTCCGTCTCCGTGGTGG 4582
>seq236154
Length=204
Score = 102 bits (112), Expect = 7e-17
Identities = 110/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| || |||||||||||||| || ||||| || ||||| ||||| || | ||||| ||
Sbjct 177 AAGATCCAAGACAAAGAAGGTATCCCACCAGACCAACAACGTTTGATCTTTGCCGGAAAG 118
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191
||| | |||||| | || ||||||| |||||||| || ||||| || || | ||
Sbjct 117 CAACTTGAAGACGGACGCACACTTTCCGACTACAACATCCAGAAGGAATCTACTCTTCAC 58
Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||| | || ||||| ||
Sbjct 57 TTGGTGTTGCGTCTCCGAGGTGGTAT 32
>seq185166
Length=13725
Score = 84.2 bits (92), Expect = 2e-11
Identities = 103/138 (75%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 27078 CAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTG 27137
|| |||||||| || |||||||| ||||||||| | || || | || || |||||| |
Sbjct 3655 CAGGACAAAGAGGGAATACCACCTGATCAACAGAGATTGATCTTTGCTGGTAAACAACTA 3714
Query 27138 GAAGACAGTTCGACCGTTTCCG-ATTACAACATTCAAAAGGAGTCGACCTTACATTTGGT 27196
||||| || ||| | || || |||||||||| || || |||||||| | || |||||
Sbjct 3715 GAAGATGGT-CGAACATTAGCGGATTACAACATCCAGAAAGAGTCGACTCTTCACTTGGT 3773
Query 27197 TTTGCGTTTGCGGGGTGG 27214
||| | | |||||||
Sbjct 3774 CTTGAGGCTTAGGGGTGG 3791
>seq224638
Length=5969
Score = 82.4 bits (90), Expect = 7e-11
Identities = 137/197 (70%), Gaps = 1/197 (1%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||||||| | || ||| |||| || ||| | || |||||||| || ||| ||
Sbjct 3548 ATGCAGATAAC-GCCAAGACTTTGACGGGAAAGACGATCACTCTTGAGGTCGAAAGCTCG 3490
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| ||||||| | || || || |||||||| |||||| | || || || || ||
Sbjct 3489 GATACGATTGACAATGTGAAGGCGAAGATTCAAGATAAAGAAAGGATCCCTCCGGACCAG 3430
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | |||| | || || ||||| | ||||| || ||| | | |||||||||
Sbjct 3429 CAGAGGCTAATCTTTGCGGGAAAACAGCTCGAAGATGGTCGGACATTAGCGGATTACAAC 3370
Query 27168 ATTCAAAAGGAGTCGAC 27184
||||| || ||||| ||
Sbjct 3369 ATTCAGAAAGAGTCAAC 3353
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433505129392604
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |