Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_028659.1
Length=142987
Score E
Sequences producing significant alignments: (Bits) Value
seq158858 98.7 9e-16
seq6041 84.2 2e-11
>seq158858
Length=235449
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/226 (70%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 69245 GTTGCTTTCACAGCCATACCCAGTGAATCACGGGTTGTGTACTGGGTGGTAAAGGAACCA 69304
|| ||||||| ||| | || || ||||| || || || ||| ||| | || ||
Sbjct 214841 GTAGCTTTCATAGCAAACCCTAGAGAATCGCGAGTCTGATATTGGAAAGTATAAGATCCC 214782
Query 69305 ACACCGTACACGATATTGCTGGATGCAAAGCCTTTATCTCTCAGACGT-TCAAAGATGTC 69363
|| ||| | || | || | || ||||||||||| ||| || || | |||| || |
Sbjct 214781 ACGCCGAAAACAACGTTTGTTGAAGCAAAGCCTTTTTCT-TCTAACTTCTCAACAATAGC 214723
Query 69364 TTTTGCACGCGCGACAGTGATAGAATCACCGTAGATCAGACCAATATGACTATCAAGAAC 69423
|||||||||| | | ||| ||||| ||||| ||||| |||||||||| |||| | |
Sbjct 214722 TTTTGCACGCTCAAGAGTAATAGAGTCACCATAGATTGCACCAATATGAGTATCTAATAG 214663
Query 69424 CTTATAGCCCTTGGAATTAACTTCACCACCGAAAATATCCCATAAA 69469
||||| ||||| | ||| | ||||| || ||||||||||||
Sbjct 214662 TTTATAACCCTTCTCAGTAATTGTTCCACCAAAGATATCCCATAAA 214617
>seq6041
Length=422222
Score = 84.2 bits (92), Expect = 2e-11
Identities = 202/303 (67%), Gaps = 2/303 (1%)
Strand=Plus/Minus
Query 101358 ATGAAAGTATATCTGGTAGGTGGCGCTGTTCGTGATGGTCTGCTGGGTCGTCCAGTTCAT 101417
||| || | ||||| || || || ||||||||||| ||| | || ||||| ||| |
Sbjct 86389 ATGCAAATTTATCTCGTTGGCGGTGCTGTTCGTGACCATCTATTAGGCCGTCCTGTTAAA 86330
Query 101418 GACCGTGATTACGTGGTTGTGGGTGCAACACACGAAGAGATGATTGAAAAAGGTTTCACC 101477
||| |||| || || || ||||| || || ||| | || ||| |||
Sbjct 86329 GACAAAGATTTTGTCGTGGTTGGTGCCACGGTGTCTGAAATGCTGGACGCAGGCTTCCAG 86270
Query 101478 CAGGTTGGCGCTGCTTTCCCGGTGTACTTGCATCCTGAAACCAAAGAAGAATACGCACTG 101537
|| || ||||| | ||| || |||| ||||||||| | | || || |||||||||
Sbjct 86269 CAAGTGGGCGCAGATTTTCCTGTGTTTTTGCATCCTATCAGTCACGATGAGTACGCACTG 86210
Query 101538 GCCCGTACTGAGCGTAAAACTGGTGAAGGCCATACTGGCTTT-GAGACCTTCTTCAGCCC 101596
|| ||||| || ||||| || | ||| || |||||| | | || | ||||||
Sbjct 86209 GCTCGTACAGAACGTAAGCAAGGCGTCGGCTATCAAGGCTTTAGTGTCCAT-GCCAGCCC 86151
Query 101597 GGATGTAACTCTGGAAGAGGATTTATCGCGTCGTGACCTGACGATCAATGCGATGGCTAA 101656
| || | | |||| ||| | ||||||||| |||| |||||||| ||||| |
Sbjct 86150 TAACGTTAGCTTAAAAGACGATATGCAGCGTCGTGATTTGACCATCAATGCAATGGCCAT 86091
Query 101657 AGA 101659
|||
Sbjct 86090 AGA 86088
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 455902422363360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |