Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_028746.1
Length=44249
Score E
Sequences producing significant alignments: (Bits) Value
seq158858 132 1e-26
>seq158858
Length=235449
Score = 132 bits (146), Expect = 1e-26
Identities = 180/251 (72%), Gaps = 0/251 (0%)
Strand=Plus/Plus
Query 15424 AGCAAATATGGCATCAAATGTCCGAATAAAATGGCACCGAAATATATTACGTTTCACAAT 15483
|||||||| ||||| ||||| || ||| | | | || ||||| | || ||
Sbjct 160015 AGCAAATACCCAATCAAGTGTCCTTATTCTATGAAAGCAGAGTACATTACAGTGCATAAC 160074
Query 15484 ACCTATAATGATGCCCCAGCAGAAAATGAGATTCGCTATATGATCGGGAACAATAACGAG 15543
|| ||||||||||| || || | || ||| | || |||||||| || | |||||||
Sbjct 160075 ACTTATAATGATGCGCCTGCTAAGAACGAGGTAAATTACATGATCGGAAATACTAACGAG 160134
Query 15544 GTTTCGTTCCACGTTGCTGTGGACGATATGGAAGCTGTTCAGGGCATTCCTTTTGATCGA 15603
||||| |||||| | || || || ||||| |||| | |||| || ||||| |||||||
Sbjct 160135 GTTTCATTCCACTTCGCAGTAGATGATATCGAAGTTATTCAAGGTATTCCGGTTGATCGT 160194
Query 15604 AATGCCTGGCATTGCGGAGACGGGAACGGAACAGGAAACCGTCAGTCCATCGGCGTAGAG 15663
||||| |||||||| || || || || | |||||||| | || ||||| || ||
Sbjct 160195 AATGCTTGGCATTGTGGTGATGGTGGTGGTAACGGAAACCGAAAATCTATCGGTGTTGAA 160254
Query 15664 ATTTGTTACTC 15674
|| ||||||||
Sbjct 160255 ATCTGTTACTC 160265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 141026252149896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |