Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_028830.1 Length=34155 Score E Sequences producing significant alignments: (Bits) Value seq53622 239 1e-58 seq232481 149 1e-31 >seq53622 Length=425 Score = 239 bits (264), Expect = 1e-58 Identities = 153/166 (92%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 17168 TTATGGAA--GAAGTGAGAAAGTGACATTTTTGGGATATACGATGGCTGACTGGGCGGAG 17225 || ||||| |||||||||||||||||||||| ||||| ||||| | ||||||||| ||| Sbjct 166 TTGTGGAATGGAAGTGAGAAAGTGACATTTTTTGGATACACGATTGGTGACTGGGCAGAG 107 Query 17226 TTCATATCAATCATAGGGGTGGGTGTAAGTGCGGGCAGCTGGCTGTTCAAAAAGATTGCC 17285 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 106 GTTATATCAATCATAGGGGTGGGTGTAAGTGCGGGCAGCTGGCTGTTCAAAAAGATTGCC 47 Query 17286 TTAGATCCATTGCGTTCTGATATTCAAATGCTTTCAGAGACAATTA 17331 |||||||||||||||||||||||||| ||||||||||||| |||| Sbjct 46 CTAGATCCATTGCGTTCTGATATTCAAGTGCTTTCAGAGACGATTA 1 >seq232481 Length=1166 Score = 149 bits (164), Expect = 1e-31 Identities = 91/97 (94%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 26304 AATAATGATTGGCTATTTACTAATTGCAGGTGGCTTCGGCGTGATTGTTGGTCACTGCTT 26363 || ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 703 AACAATGATTGGTTATTTACTAATTGCTGGTGGCTTCGGCGTGATTGTTGGTCACTGCTT 644 Query 26364 AGGCCACAAAGGAAATTGGAGGCAGTGGATCGAATGA 26400 |||||||| |||||||||||||||||||| |||||| Sbjct 643 AGGCCACAGCGGAAATTGGAGGCAGTGGATTGAATGA 607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108827953328312