Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_028841.1 Length=44952 Score E Sequences producing significant alignments: (Bits) Value seq158858 125 2e-24 >seq158858 Length=235449 Score = 125 bits (138), Expect = 2e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 19627 TATATTACGTTTCACAACACGTCCAATGATGCTCCTGCAGAAAATGAGATCCGTTATATG 19686 || ||||| | || ||||| | |||||||| ||||| | || ||| | ||| ||| Sbjct 160057 TACATTACAGTGCATAACACTTATAATGATGCGCCTGCTAAGAACGAGGTAAATTACATG 160116 Query 19687 ATCGGGAATAATAATGAGGTTTCGTTCCACGTTGCTGTGGACGATAAGGAAGCTGTTCAG 19746 ||||| |||| ||| |||||||| |||||| | || || || |||| |||| | |||| Sbjct 160117 ATCGGAAATACTAACGAGGTTTCATTCCACTTCGCAGTAGATGATATCGAAGTTATTCAA 160176 Query 19747 GGCATTCCTTTTGATCGTAATGCCTGGCATTGTGGAGACGGGAACGGAACAGGTAACCGT 19806 || ||||| ||||||||||||| ||||||||||| || || || | || ||||| Sbjct 160177 GGTATTCCGGTTGATCGTAATGCTTGGCATTGTGGTGATGGTGGTGGTAACGGAAACCGA 160236 Query 19807 CAGTCCATCGGCGTAGAGATTTGCTATTC 19835 | || ||||| || || || || || || Sbjct 160237 AAATCTATCGGTGTTGAAATCTGTTACTC 160265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143268713421104