Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_028851.1 Length=37995 Score E Sequences producing significant alignments: (Bits) Value seq158858 105 2e-18 >seq158858 Length=235449 Score = 105 bits (116), Expect = 2e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 14265 ATGACACCAAAATATATTACGTTTCACAACACGTCCAATGATGCCCCAGCAGAAAATGAG 14324 |||| | || | || ||||| | || ||||| | |||||||| || || | || ||| Sbjct 160045 ATGAAAGCAGAGTACATTACAGTGCATAACACTTATAATGATGCGCCTGCTAAGAACGAG 160104 Query 14325 ATTCGCTATATGATTGGAAACAACAATGAAGTCAGCTTCCACGTTGCTGTGGACGATAAA 14384 | || ||||| ||||| | || || || |||||| | || || || |||| Sbjct 160105 GTAAATTACATGATCGGAAATACTAACGAGGTTTCATTCCACTTCGCAGTAGATGATATC 160164 Query 14385 GAAGCTGTTCAGGGCATTCCTTTTGATCGAAATGCCTGGCATTGTGGAGACGGGAACGGG 14444 |||| | |||| || ||||| ||||||| ||||| ||||||||||| || || || Sbjct 160165 GAAGTTATTCAAGGTATTCCGGTTGATCGTAATGCTTGGCATTGTGGTGATGGTGGTGGT 160224 Query 14445 ACAGGAAACCGTCAGTCCATCGGCGTAGAAATTTGTTACTC 14485 | |||||||| | || ||||| || ||||| |||||||| Sbjct 160225 AACGGAAACCGAAAATCTATCGGTGTTGAAATCTGTTACTC 160265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121076959418552