Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_028872.1 Length=86252 Score E Sequences producing significant alignments: (Bits) Value seq158858 82.4 4e-11 >seq158858 Length=235449 Score = 82.4 bits (90), Expect = 4e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 84800 AGTGTTGTTTCAGACACTTATAACTTCTGGAGAACTGTGTCAGAAATTTTACCAGCACTT 84859 ||||| ||||||||||| ||| | |||||| | || ||||||| | || ||| Sbjct 214432 AGTGTAGTTTCAGACACGTATGATTTCTGGGCAGTAGTAGGAGAAATTCTTCCTCGTCTT 214491 Query 84860 CGTAAAGAAATTATGGAACGTGATGGCAAACTGGTAATTCGTCCTGACTCTGGAGACCCT 84919 || ||||| |||||||||||||| |||| ||||||||||| |||||||||| Sbjct 214492 AAGAAGGAAATCATGGAACGTGATGGTCGTATGGTTATTCGTCCTGATAGTGGAGACCCT 214551 Query 84920 GTACATATTGTCACAGGT 84937 || | |||| | || ||| Sbjct 214552 GTTCTTATTCTTACTGGT 214569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 274983097425004