Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_028881.1
Length=170473
Score E
Sequences producing significant alignments: (Bits) Value
seq249645 131 2e-25
>seq249645
Length=476466
Score = 131 bits (144), Expect = 2e-25
Identities = 276/409 (67%), Gaps = 2/409 (0%)
Strand=Plus/Minus
Query 142858 GTTCAACTGGATTCCGTAGTCCATATGACGAATACGGTTCTCATCAACGCCTTTGTTGTT 142917
||| ||||| | ||||||||||||||||| | |||||| || ||||| || ||| ||
Sbjct 264957 GTTTAACTGTACGCCGTAGTCCATATGACGGACACGGTTGTCTTCAACACCGCGGTTATT 264898
Query 142918 TTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGC 142977
||| || || || | |||||||| |||||||| | || || | || |||||
Sbjct 264897 TTTGAGTACCAGTAATGACTCAACTTCTAAATGCCATAGTGGGTAGAACAACGTCGCAGC 264838
Query 142978 GCCGCCACGGATTCCACCTTGTGAACATGATTTAACTGCAGTCTGGAAATGCTTCCAGAA 143037
|||||||| | ||||||||||| || ||||||| || || ||||| || | ||
Sbjct 264837 ACCGCCACGTACGCCACCTTGTGAGCAGCATTTAACGGCCGTTTGGAACAATTTATAAAA 264778
Query 143038 TGGAATAACACCGGTATGTTTGACTTCACCCATACCAATACGAGAACCTTCAGCACGAAT 143097
|||||| || ||||| | ||||||| || ||| | ||| ||||| ||
Sbjct 264777 AGGAATACAGCCAGTATGCTGTGCTTCACCGCCACGGATAGGGCTACCAAGGGCACGGAT 264718
Query 143098 CATACCAACGTTGATACCAATACCTGCACGTTTAGAAATATACTCGATTATTGAGTTAGC 143157
||| ||||||| || ||||| ||||| | || | ||| | || | | |||
Sbjct 264717 ACGACCTGCGTTGATGCCGATACCAGCACGCTGTGACACATAGCGTACGATGGCGCTAGT 264658
Query 143158 AGTTTTATTAATTGA-TTTCAGCGAGTCACCTGCTTCAATAACAACGCAAGAACTAAACT 143216
|| || || || | | ||| | ||||| ||| || | ||||| || |||||||
Sbjct 264657 GGTGGCGTTGATAGAGTCTAAGCTA-TCACCACATTCGATTAAGACGCACGAGCTAAACT 264599
Query 143217 GACGGGTCGGGGTACGAGCACCAGCCATAATAGGAGTAGGCAATGAAAT 143265
|||| | || ||||| |||| | ||| || || || || | ||| ||
Sbjct 264598 GACGCGATGGCGTACGCACACCTGACATGATTGGCGTTGGTAGTGAGAT 264550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543563821211040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |