Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_028894.1 Length=170336 Score E Sequences producing significant alignments: (Bits) Value seq249645 143 3e-29 >seq249645 Length=476466 Score = 143 bits (158), Expect = 3e-29 Identities = 196/274 (72%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 140766 TTATTCAACTGGACACCATAGTCCATATGCCTGATACGGTTTTCTTCAACGCCTTTGTTG 140825 || || ||||| || || ||||||||||| | || |||||| |||||||| || ||| Sbjct 264959 TTGTTTAACTGTACGCCGTAGTCCATATGACGGACACGGTTGTCTTCAACACCGCGGTTA 264900 Query 140826 TTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCA 140885 || || || || ||||| |||||||| |||||||| | || || | || ||| Sbjct 264899 TTTTTGAGTACCAGTAATGACTCAACTTCTAAATGCCATAGTGGGTAGAACAACGTCGCA 264840 Query 140886 GCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCCGTTTGGAAATGTTTCCAG 140945 || |||||||| | ||||||||||| || ||||||| ||||||||||| ||| | Sbjct 264839 GCACCGCCACGTACGCCACCTTGTGAGCAGCATTTAACGGCCGTTTGGAACAATTTATAA 264780 Query 140946 AACGGAATAACACCAGTATGCTTGACTTCACCCATACCGATTTTCGAACCTTCAGCACGA 141005 || |||||| |||||||||| ||||||| || ||| ||| ||||| Sbjct 264779 AAAGGAATACAGCCAGTATGCTGTGCTTCACCGCCACGGATAGGGCTACCAAGGGCACGG 264720 Query 141006 ATCATGCCAACGTTGATACCGATACCTGCACGCT 141039 || || ||||||| |||||||| ||||||| Sbjct 264719 ATACGACCTGCGTTGATGCCGATACCAGCACGCT 264686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543126885620480