Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_028917.1 Length=41931 Score E Sequences producing significant alignments: (Bits) Value seq81513 165 2e-36 >seq81513 Length=399 Score = 165 bits (182), Expect = 2e-36 Identities = 195/260 (75%), Gaps = 3/260 (1%) Strand=Plus/Minus Query 29996 AATTCTGTTTGTAATAATTTTCTAGTTGATTCCACTGGTTCTCCCCAGTGAAGTTCTATA 30055 ||||| |||| ||| || ||| || ||| |||||||||||||||| | ||| ||| Sbjct 399 AATTCACTTTGAAATCTTTGTCTTAATGCTTCTACTGGTTCTCCCCAGTACAATTCAATA 340 Query 30056 TCTCTACACATTGCGAATAT-TTTTTGCGTTGTTCTATAGATAGTTTTTTATTATCCGGA 30114 ||| ||||||| || ||||| ||||| ||||| || ||||| | ||||||||| ||| Sbjct 339 TCTTTACACATGGCAAATATCTTTTTACGTTGGTCAATAGAAATCAATTTATTATCTGGA 280 Query 30115 ACCTCTACTTCTGCTTTTAGTGGATATCCGTTTTCTAGTAAGT-CAATGTGACTTTGTTC 30173 || ||| | || |||| ||| ||||| |||| ||||| | ||||||| | ||| Sbjct 279 ACAGTTACATTAGCGTTTAAGCTATAACCGTTATCTA-TAAGTTCTGTGTGACTATTTTC 221 Query 30174 AAGTTCAACACCAGTAGCAACGACGGAATAAGTGCCGTCATTGTCTTTCTGGTATCTTGT 30233 | |||||||||||| ||||||||||||||| | ||||| | || |||||||| || Sbjct 220 TAATTCAACACCAGTGGCAACGACGGAATAAATACCGTCGCTATCCAATTGGTATCTAGT 161 Query 30234 AATGTATTGCATTTAAACCA 30253 || | |||||||||| || Sbjct 160 GATTTGCTGCATTTAAATCA 141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133632190661048