Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_028935.1
Length=88698
Score E
Sequences producing significant alignments: (Bits) Value
seq158858 89.7 3e-13
>seq158858
Length=235449
Score = 89.7 bits (98), Expect = 3e-13
Identities = 152/218 (70%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 18023 ATATCTTTGGTGGAACTGTAAACGCTAAAGGCTACAAAGTTCTTGATGAGCACATTGGCT 18082
|||||||||||||||| | | | || || || ||| | | ||| || |||||
Sbjct 214625 ATATCTTTGGTGGAACAATTACTGAGAAGGGTTATAAACTATTAGATACTCATATTGGTG 214684
Query 18083 TAATCTACGGTGATTCTATCACTCTGGAACGTGCTGAAGAGATTCTT-AGTCGTCTTGCT 18141
|||||| ||||| ||||| ||||| || ||||| ||| ||| || || || | |
Sbjct 214685 CAATCTATGGTGACTCTATTACTCTTGAGCGTGCAAAAGCTATTGTTGAGAAGT-TAGAA 214743
Query 18142 GAAAAGGGCTTTGCAAGTTCTAACGTTGTTTTTGGTGTTGGTTCATACACTTACCAGTAC 18201
||||| |||||||| | ||||||||||| || || || || || |||| ||| ||
Sbjct 214744 GAAAAAGGCTTTGCTTCAACAAACGTTGTTTTCGGCGTGGGATCTTATACTTTCCAATAT 214803
Query 18202 CTGACTCGTGATACCTTTGCATTCGCTGTCAAAGCAAC 18239
| |||||| ||| | | | || ||| | ||||| ||
Sbjct 214804 CAGACTCGCGATTCTCTAGGGTTTGCTATGAAAGCTAC 214841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 282784805477172
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |