Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_028935.1 Length=88698 Score E Sequences producing significant alignments: (Bits) Value seq158858 89.7 3e-13 >seq158858 Length=235449 Score = 89.7 bits (98), Expect = 3e-13 Identities = 152/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 18023 ATATCTTTGGTGGAACTGTAAACGCTAAAGGCTACAAAGTTCTTGATGAGCACATTGGCT 18082 |||||||||||||||| | | | || || || ||| | | ||| || ||||| Sbjct 214625 ATATCTTTGGTGGAACAATTACTGAGAAGGGTTATAAACTATTAGATACTCATATTGGTG 214684 Query 18083 TAATCTACGGTGATTCTATCACTCTGGAACGTGCTGAAGAGATTCTT-AGTCGTCTTGCT 18141 |||||| ||||| ||||| ||||| || ||||| ||| ||| || || || | | Sbjct 214685 CAATCTATGGTGACTCTATTACTCTTGAGCGTGCAAAAGCTATTGTTGAGAAGT-TAGAA 214743 Query 18142 GAAAAGGGCTTTGCAAGTTCTAACGTTGTTTTTGGTGTTGGTTCATACACTTACCAGTAC 18201 ||||| |||||||| | ||||||||||| || || || || || |||| ||| || Sbjct 214744 GAAAAAGGCTTTGCTTCAACAAACGTTGTTTTCGGCGTGGGATCTTATACTTTCCAATAT 214803 Query 18202 CTGACTCGTGATACCTTTGCATTCGCTGTCAAAGCAAC 18239 | |||||| ||| | | | || ||| | ||||| || Sbjct 214804 CAGACTCGCGATTCTCTAGGGTTTGCTATGAAAGCTAC 214841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 282784805477172