Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq28607 1265 0.0 seq217943 183 4e-41 seq218717 120 4e-22 seq24310 116 5e-21 >seq28607 Length=83266 Score = 1265 bits (1402), Expect = 0.0 Identities = 2521/3709 (68%), Gaps = 150/3709 (4%) Strand=Plus/Minus Query 183587 GATTTCCTCACCTTTAAAGGTGGTTTGAATCCTGTAACTGGCAGTCTTTGGATGACAGAT 183646 || || || || ||| || || || |||| || ||||| |||| ||| | || ||| Sbjct 40650 GAATTTCTTACTTTTCGTGGCGGATTAGATCCAGTGACTGGGGGTCTGTGGTTAACCGAT 40591 Query 183647 ATAGCACATCATCACCTAGCAATAGCAGTTATGTTTATCATTGCAGGTCATATGTATCGC 183706 |||||||||||||| |||| || ||| || | || | || || |||||||||||| | Sbjct 40590 ATAGCACATCATCATTTAGCTATCGCAATTCTTTTCCTAATAGCGGGTCATATGTATAGG 40531 Query 183707 ACAAACTGGGGTATTGGTCAATCAATGAAAGAGATATTAGATGGTCAGAATGGTTTCCCA 183766 || ||||||||||||||||| | ||||| || || || | ||| || || |||| Sbjct 40530 ACCAACTGGGGTATTGGTCATGGTCTAAAAGATATTTTGGAGGCTCATAAAGG---CCCA 40474 Query 183767 ----CAGGGTGTCACACACAGAGGATTATATGAATTTCTAGCAGAATCAAGACATGCACA 183822 |||| | || | ||| |||||||| ||||| || |||| | ||||| || Sbjct 40473 TTTACAGGCCAAGGC-CATAAAGGCCTATATGAAATTCTAACAACATCATGGCATGCTCA 40415 Query 183823 ACTATCACTGAATCTGGCAATGCTAGGATCTATCAGTATCATAGTTTCACATCATATGTA 183882 | |||| || || ||||| ||| |||| ||| | | || | || | || |||||||| Sbjct 40414 ATTATCTCTTAACCTGGCTATGTTAGGCTCTTTAACCATTGTTGTAGCTCACCATATGTA 40355 Query 183883 TGCAATGCCACCTTATCCATATCTTGGTATTGAATATCCAACAGTAGTAGGATTATTCAC 183942 | | ||||| |||||||||||||| | || ||| ||| | ||| | | ||| ||||| Sbjct 40354 TTCCATGCCCCCTTATCCATATCTAGCTACTGACTATGCTACACAACTGTCATTGTTCAC 40295 Query 183943 CCATCATATGTGGATAGGTGGTTTTCTTATTGTGGGTGCATCAGCACATGCTTCAATTGC 184002 ||||| |||||||| ||||| ||||| || || ||||| | || ||||| | ||| Sbjct 40294 ACATCACATGTGGATTGGTGGATTTCTCATAGTTGGTGCTGCTGCGCATGCAGCCATTTT 40235 Query 184003 TATGATAAGAGACTATAATCCTGTTCAAC-ATATGGGAA--ATGTATTAGATAGAATACT 184059 |||| ||||||||||| |||| | | | |||| || || |||||||| | | || Sbjct 40234 TATGGTAAGAGACTATGATCCAACTAATCGATAT---AACGATTTATTAGATCGTGTCCT 40178 Query 184060 TAAATCTAGAGATGCAATCATCAGTCACTTGAACTGGGTATGCATCTTTTTAGGTTTTCA 184119 | | | ||||||||||| || | ||||||||||| || ||| |||| || || Sbjct 40177 GAGGCATCGCGATGCAATCATATCACATCTCAACTGGGTATGTATATTTCTAGGCTTCCA 40118 Query 184120 TAGTTTTGGTCTTTATATTCACAATGATATTATGAGAGCATTGGGTAGACCTAATGATCT 184179 ||||||||| | |||||||| ||||||| ||||| || || || | || | ||| | Sbjct 40117 CAGTTTTGGTTTGTATATTCATAATGATACCATGAGTGCTTTAGGGCGTCCACAAGATAT 40058 Query 184180 ATTCAGTGATACAGCAATACAATTACAACCTGTATTTGCACAGTCTGTTCAGAGATTACA 184239 || ||||| || |||||||||||||| || ||||| || | | || | || Sbjct 40057 GTTTTCAGATACTGCTATACAATTACAACCAGTCTTTGCTCAATGGATACAAAATACCCA 39998 Query 184240 TGCTTCATTATATAATGT------CTCTGATGTA--------------TTT--------- 184270 ||||| | | | ||| | ||| || | ||| Sbjct 39997 TGCTTTAGCACCTGGTGTAACAGCCCCTGGTGAAACAGCGAGCACCAGTTTAACTTGGGG 39938 Query 184271 ----GGTGGATCAACCACAATGGTTGGTGGTAAGATTGCTAATGCT-CCTTTTGTACTAG 184325 |||| | | || ||| |||| || | ||| || | ||| || | ||| Sbjct 39937 GGGCGGTGAGTTAGTAGCAGTGG---GTGGCAAAGTAGCTT-TGTTACCTATTCCATTAG 39882 Query 184326 GTACAGCAGACTTTATGATACATCACATACACGC-TTTCCAGATTCATGTTTGTGTATTA 184384 | |||||||| ||| | ||||||| || || || ||| || |||||||| ||||| Sbjct 39881 GCACAGCAGATTTTTTAGTACATCATATTCATGCATTTACA-ATTCATGTCACGGTATTG 39823 Query 184385 ATTCTTCTCAAGGGTGTTTTATACTCTAGAAACTCACAATTAATACCAGATAAGAGTAAG 184444 || || | || |||||||||| || | | ||| | |||||||||||||| || || Sbjct 39822 ATACTGTTGAAAGGTGTTTTATTTGCTCGTAGCTCGCGTTTAATACCAGATAA-AGCAAA 39764 Query 184445 T-TAGGATTCAGATTCCCTTGTGATGGTCCTGGTAGAGGAGGCACTTGTCAGGTATCAGG 184503 | | || || | |||||||||||||| ||||| |||||||| || ||||| ||||| | Sbjct 39763 TCTTGGTTTTCGTTTCCCTTGTGATGGGCCTGGAAGAGGAGGAACATGTCAAGTATCCGC 39704 Query 184504 ATGGGATCATGTATTCCTTGGTTTATTCTGGATGTATAATTGCATCTCTATAGTAATCTT 184563 ||||||||||| ||| | || ||||||||||||| ||| || || ||||||| || Sbjct 39703 TTGGGATCATGTCTTCTTAGGACTATTCTGGATGTACAATGCTATTTCGGTAGTAATATT 39644 Query 184564 CCACTTTAGTTGGAGAATGCA---AGATGTATGGGGTCT--------ATCA--------- 184603 ||| || ||||||| |||||| |||||| |||||| |||| Sbjct 39643 CCATTTCAGTTGGAAAATGCAGTCAGATGTTTGGGGTAGTATAAGTGATCAAGGGGTGGT 39584 Query 184604 -------------GGAGGTAACTTTGCTCAGAGTTCAATTACAATCAATGGATGGTTGAG 184650 ||||| |||||||| |||||||| ||||| || ||||| ||| | | Sbjct 39583 AACTCATATTACTGGAGGAAACTTTGCACAGAGTTCGATTACTATTAATGGGTGGCTCCG 39524 Query 184651 AGACTTCTTATGGTCACAGTCAAGTCAAGTTCTCAATAGTTATGGACAA--GACATCAGC 184708 || ||||||||| |||| || || || | | |||||| | ||| || Sbjct 39523 CGATTTCTTATGGGCACAAGCATCCCAGGTAATTCAGTCTTATGGTTCTTCGTTATCTGC 39464 Query 184709 ATGTATGGTTTGCTATTTCTTGGAGCACATTTTGTATGGGCATTCAGTTTGATGTTCCTA 184768 || ||||| | | || || || || |||||||||||||| |||||||| ||||| ||| Sbjct 39463 AT--ATGGTCTTTTTTTCCTAGGTGCTCATTTTGTATGGGCTTTCAGTTTAATGTTTCTA 39406 Query 184769 TGGAGTGGTAGAGGATACTGGCAAGAGTTGATAGAGTCTATTGCTTGGGCACATAACAAA 184828 | || || | || || |||||||| | || || || |||| |||||| ||||| ||| Sbjct 39405 TTCAGCGGGCGCGGTTATTGGCAAGAACTTATTGAATCCATTGTTTGGGCTCATAATAAA 39346 Query 184829 TTAAAACTTGCACCTACCATTCAACCAAGAGCAATGTCAATTACACAAGGACGTGCTGTT 184888 |||||| |||| ||| | | ||| || ||||| || ||| ||||||||||||||| Sbjct 39345 TTAAAAGTTGCTCCTGCTACTCAGCCTAGAGCCTTGAGCATTGTACAAGGACGTGCTGTA 39286 Query 184889 GGAGTTGCACACTTCTTACTTGGAGGTATTGCCACAACATGGGCATTCTTCTTTGCTCAC 184948 ||||| | || | | | || || || ||||||||||||||||| |||||||| || Sbjct 39285 GGAGTAACCCATTACCTTCTGGGTGGAATTGCCACAACATGGGCGTTCTTCTTAGCAAGA 39226 Query 184949 CTTATCCCCTTAAGTTAAATCATGGCTACTA-------AAAC-------------AAAAT 184988 |||| | || | ||| |||||| | ||| || || Sbjct 39225 ATTATTGCAGTAGGATAA----TGGCTAGGAGGATTTGAAAGGCATTATGGCATTAAGAT 39170 Query 184989 TTCCAAAATTTAATCAAGATTTGGCAAGTGATCCTACAACTAGGAGATTGTGGTATGGAT 185048 |||||| |||| |||| || || || || || ||| | | | |||| ||| Sbjct 39169 TTCCAAGGTTTAGCCAAGGCTTAGCTCAGGACCCCACTACTCGTCGTATTTGGTTTGGTA 39110 Query 185049 TAGCAACTGCACATGACTTTGAGAGTCATGACAATATGACAGAAGAGAAGT-TATATCAA 185107 | || || ||||||||||| ||||||||||| |||| || ||||| | || | ||||| Sbjct 39109 TTGCTACCGCACATGACTTCGAGAGTCATGATGATATTACTGAAGA-ACGTCTTTATCAG 39051 Query 185108 AAATTATTTGCTACACACTTTGGTCATCTTGCAATTATCTTTCTATGGGTTGCAGGTAAT 185167 || | |||||| | || || || || | ||||| || ||||| ||| | | || ||| Sbjct 39050 AATATTTTTGCTTCTCATTTCGGGCAATTAGCAATAATTTTTCTGTGGACTTCCGGAAAT 38991 Query 185168 TTAATTCATATAGCATGGCAAGGTAACTTTGA-ACAGTTTGTAGC--AGACCCACAACAT 185224 ||| ||||| |||| |||||||| || ||||| ||| || | | |||||| |||| Sbjct 38990 TTATTTCATGTAGCTTGGCAAGGAAATTTTGAGACA---TGGATCCAAGACCCTTTACAT 38934 Query 185225 GTGATACCTATAGCACATAGAATATGGGATCCTCATTTTGGTCAAGGTGCAACAGATGCA 185284 || | ||| || || ||| || ||||||||||||||||||||| || || || Sbjct 38933 GTAAGACCGATTGCTCATGCTATTTGGGATCCTCATTTTGGTCAACCGGCTGTGGAAGCG 38874 Query 185285 TACACACAGGCAGGTTCTACTTTTCCTGTGAACAGATTGTATTCTGGACTGTATCATTGG 185344 | || | | |||| || | || ||||| | | |||||||| | ||||| ||| Sbjct 38873 TTTACTCGAGGAGGTGCTCTTGGCCCGGTGAATATAGCTTATTCTGGTGTTTATCAGTGG 38814 Query 185345 TGGTACACAGTTGGTATGAGAACTAATATGCAACTGTATACTGGTGGTGCATTTATGATT 185404 ||||| ||| | || | | |||||| | || |||||||| | | ||| | | Sbjct 38813 TGGTATACAATCGGCTTACGTACTAATGAAGATCTTTATACTGGAGCTCTTTTTCTATTA 38754 Query 185405 CTACTAGCATTGGTATCTTTACTTGGTGCTCAATTACATCTGAAACCAAAGTTTGCACCT 185464 | || | |||| ||| | || | | ||||| || ||||||| | ||| Sbjct 38753 TTTCTTTCTGCCCTATCCTTAATAGGGGGTTGGTTACACCTCCAACCAAAATGGAAACCA 38694 Query 185465 AAGCTTGCTTGGTTTAAAGATAATGAGAACAGATTAAATCATCATCTATCAGTTCTATTT 185524 | || | ||||| ||| || ||| | | ||||||||| | |||| ||||| Sbjct 38693 AGAGTTTCGTGGTTCAAAAATGCTGAATCTCGTCTGAATCATCATTTGTCAGGACTATTC 38634 Query 185525 GGATTCAGTTCTATTGCATGGGCTGGTCATTTGATACACGTAGCAATACCTGCATCAAGA 185584 || | || || | || ||| | |||||||| | || || || || |||||||| || Sbjct 38633 GGGGTAAGCTCCTTGGCTTGGACAGGTCATTTAGTCCATGTCGCTATTCCTGCATCCAGG 38574 Query 185585 GG--AATCACTGTAGATTGGACTAATTATGTGTTTATGAA--ACCTCATCCTGCAGGTTT 185640 || ||| | | ||| ||| ||||| | | | ||| | ||| ||||| ||| || Sbjct 38573 GGGGAATATGT-TCGAT-GGAATAATT-TCT-TAAATGTATTACCGCATCCCCAAGGGTT 38518 Query 185641 ACTGCCATTCTTTACAGGAAACTGGGGTGTTTATGCACAAAATCCTGATGGATTAAATCA 185700 | ||| | ||||| || | ||| | ||||||| ||||| || ||| | | ||| Sbjct 38517 AGGCCCACTTTTTACGGGTCAGTGGAATCTTTATGCTCAAAACCCCGATTCAAGCAGTCA 38458 Query 185701 AATATTCAATACAACAGAGGGTTCTGGAACAGCAATATTAACA-TTCATGGGTGGTTTCC 185759 |||| ||| | | || || ||||| || || ||||| ||| |||| || |||| Sbjct 38457 TTTATTTGGTACCTCCCAAGGATCAGGAACTGCCATTTTAACCCTTCTTGGG-GGATTCC 38399 Query 185760 ATCCACAAACAGAGGCATTATGGTTGACTGATATAGCACATCATCACCTTGCAATAGGAG 185819 |||||||||| | |||||| | || ||||| ||||||||||| || || || | | Sbjct 38398 ATCCACAAACGCAAAGTTTATGGCTAACCGATATGGCACATCATCATCTAGCTATCGCAA 38339 Query 185820 TAATATTCATTATTGCAGGTCATATGTATAGAAGTGCTTGGGGTATTGGTCACTCAATGA 185879 | | ||| | ||||| |||||||||||||||| | | || || || ||| || | Sbjct 38338 TTCTTTTCCTCATTGCGGGTCATATGTATAGAACTAACTTTGGAATCGGACACAGTATAA 38279 Query 185880 AGGAGATACTTGAAGCACATACACCACCAAGAGGAGGACTAGGTGCA-GGTCATAAAGGA 185938 | || | | |||||||||| || || ||||| | || || || || ||||| || Sbjct 38278 AAGATCTTTTAGAAGCACATATTCCTCCGGGAGGACG-CTTGGGGCGTGGGCATAAGGGT 38220 Query 185939 TTATATGAAACAGTTACAGACTCATTACACCTACAGTTAGGTCTTGCACTTGCATCTCTA 185998 | ||||| ||| | | | || | || | || ||||| ||||| || || || || Sbjct 38219 CTTTATGATACAATCAATAATTCGATTCATTTTCAATTAGGCCTTGCTCTAGCCTCCTTA 38160 Query 185999 GGTGTTGTTACTAGTCTGGTGGCACAACATATGTACTCAATGCCATCCTATGCTTTCATA 186058 || ||| ||||| |||| || ||||| |||||||| | || | ||||| |||||| Sbjct 38159 GGGGTTATTACTTCCTTGGTAGCTCAACACATGTACTCTTTACCTGCTTATGCGTTCATA 38100 Query 186059 GCACAGGCGCATACTACGCAAGCTGCTCTATATGTTCATCATCAATACATTGCA--ACTG 186116 || || | ||| || |||||||| ||||| ||||| |||||||||||| | | Sbjct 38099 GCGCAAGATTTTACGACTCAAGCTGCGTTATATACCCATCACCAATACATTGCAGGATTC 38040 Query 186117 CTCTGATGGTTGGTGCTTTTGCGCATGGAGCAATATTTTTTGTTAGAGACTTTGATCCTA 186176 || ||| || |||||||| |||||||| ||||||||| ||||||| | |||| Sbjct 38039 ATC--ATGACAGGAGCTTTTGCTCATGGAGCTATATTTTTTATTAGAGATTACAATCCAG 37982 Query 186177 CTCTGAATAAGGACAATGTTCTTGATAGAATGCTACAGCACAAAGAAGCAATTATAAGTC 186236 | |||| |||| || || | | |||||| || | || |||||||| || ||| | Sbjct 37981 AACAGAATGAGGATAACGTATTGGCAAGAATGTTAGACCATAAAGAAGCTATCATATCCC 37922 Query 186237 ACTTAAGTTGGGTATCACTATTCCTTGGATTCCATACTTTAGGAATCTATGTCCATAATG 186296 | |||||||||| || || || || ||||||||||| || | ||||| ||||||| Sbjct 37921 ATTTAAGTTGGGCCAGCCTCTTTCTAGGGTTCCATACTTTGGGCCTTTATGTTCATAATG 37862 Query 186297 ATGTAGTAATGGCATTTGGTCATCCTGAGAGACAGATATTAATTGAACCTATATTTGCAC 186356 | || | | || |||||| ||| || | ||| || || || ||||| |||||||| | Sbjct 37861 ACGTCATGCTTGCTTTTGGTACTCCCGAAAAACAAATCTTGATCGAACCCATATTTGCCC 37802 Query 186357 AGTGGATACAGGCAGCATCA-GGTAAGATGATGTATGGATTAAGTTTCTTACTATCTGAT 186415 | |||||||| | || ||| || || | |||||||| | | | ||||| Sbjct 37801 AATGGATACAATCTGC-TCATGGGAAAACTTCATATGGATTTGATGTACTTTTATCTTCG 37743 Query 186416 CCAAATAGTGCTGCAAGTCTAGCAG--CAGAGAGTATGCCTGGTAATCATTACTGGATGA 186473 ||||| | | ||| | || | | || |||| ||| | |||| | | Sbjct 37742 ACAAATGGCCCAGCATTTAATGCGGGTCGAAGCATATGGCTG-----CCCGGCTGGTTAA 37688 Query 186474 GTGCTATGAATGATCAAACAAACAGTCTGTTTCTACCAATAGGACCTGCTGATTTATTAG 186533 |||||| ||||| | | || | || || ||||||| |||| ||||| || | Sbjct 37687 ATGCTATTAATGAGAATAGTAATTCATTATTCTTAACAATAGGCCCTGGAGATTTCTTGG 37628 Query 186534 TTCATCATGCTATTGCACTTGGATTACATACTACAACTTTAATCCTAGTCAAGGGTGCAT 186593 |||||||||| ||||| | || |||||||| || || || ||| |||| || ||||| | Sbjct 37627 TTCATCATGCGATTGCTTTAGGTTTACATACAACTACATTGATCTTAGTAAAAGGTGCTT 37568 Query 186594 TAGATGCTAGAGGTTCAAAACTCATACCAGATAAGAAAGATTTAGGATATTCATTCCCTT 186653 ||||||| | ||||| || | || |||||||| || ||||| || ||| || |||| Sbjct 37567 TAGATGCACGTGGTTCCAAGTTAATGCCAGATAAAAAGGATTTCGGGTATAGTTTTCCTT 37508 Query 186654 GTGATGGTCCAGGCAGAGGTGGTACTTGTGATAGTTCTGGTTGGGATGCTTTCTATCTCT 186713 | |||||||| || |||||||||||||||||| ||| | |||||| || || ||| | Sbjct 37507 GCGATGGTCCGGGACGAGGTGGTACTTGTGATATTTCGGCTTGGGACGCATTTTATTTGG 37448 Query 186714 CTGTGTTCTGGGCATTCAATACAATAGCATGGGCAGATTTTTATTGGCACTGGAAGAACC 186773 | || || ||| || ||||| || | ||||| |||||||||||| ||||| || Sbjct 37447 CAGTTTTTTGGATGTTAAATACTATTGGATGGGTTACTTTTTATTGGCATTGGAAACACA 37388 Query 186774 TTGCTAGTTGGCAAGGTAATCAGGCACAATTCAATACATCAGGAACATATCTTATGGGTT 186833 | | ||||| ||||| | || || ||| ||| || ||| | ||||| | Sbjct 37387 TCACATTATGGCAGGGTAACGTTTCCCAGTTTAATGAATCTTCCACTTATTTGATGGGAT 37328 Query 186834 GGTTCAGAGATTATCTCTGGGCGAATAGTGCGCCTGTAATCACAGGGTACACACCATTTG 186893 |||| ||||||||||| ||| || | | | | |||| || || | || |||| Sbjct 37327 GGTTAAGAGATTATCTATGGTTAAACTCTTCACAACTTATCAATGGATATAACCCGTTTG 37268 Query 186894 GTATGAATAATCTCTCTGTATGGGCATGGATGTTCTTGTTTGGTCATTTAGTTTGGGCAA 186953 ||||||||| | | || || ||||||||||||||||| ||||| ||| | |||||||| | Sbjct 37267 GTATGAATAGTTTATCAGTCTGGGCATGGATGTTCTTATTTGGGCATCTTGTTTGGGCTA 37208 Query 186954 CAGGATTTATGTTCCTTATTTCTTGGAGAGGTTATTGGCAAGAGTTAATTGAGACTCTTG 187013 | |||||||||||| | ||||| ||| | ||||||||||| || || ||||| ||| | | Sbjct 37207 CTGGATTTATGTTCTTAATTTCCTGGCGTGGTTATTGGCAGGAATTGATTGAAACTTTAG 37148 Query 187014 CTTGGGCACATCAAAGAACTCCAATAGCAAATATAGCAGGTTGGAGAGATAAACCAGTGG 187073 | ||||| ||| || | || || | |||||| | | |||| |||||||||||| | Sbjct 37147 CATGGGCTCATGAACGTACACCTTTGGCAAATTTGATTCGATGGAAAGATAAACCAGTAG 37088 Query 187074 CACTTTCTATTGTTCAAGCAAGACTAGTTGGTTTATCACATTTTGCCATAGGATTTGTGC 187133 | ||||| ||||| ||||||||| | ||||| ||| | || ||| | |||| | | | Sbjct 37087 CTCTTTCAATTGTGCAAGCAAGATTGGTTGGATTAGCTCACTTTTCTGTAGGTTATATAT 37028 Query 187134 TTACCTATGCACCATTCCTGATAGCAACAACAGCAAGTAGATACGGTTA 187182 | || ||||| | ||| |||| || | ||| | | | || |||||| Sbjct 37027 TCACTTATGCGGCTTTCTTGATTGCCTCCACATCGGGCAAATTCGGTTA 36979 Score = 553 bits (612), Expect = 2e-152 Identities = 698/959 (73%), Gaps = 0/959 (0%) Strand=Plus/Minus Query 189705 TTGGTTGGTTTGGTGTACTCATGATTCCATGCTTGCTCGCAGCAGCAGCATGCTTCGTTG 189764 |||| ||||||||||| | ||||| || ||| | | ||| | | || || Sbjct 1462 TTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTA 1403 Query 189765 TTGCATTTATTGCAGCACCACCTGTAGACATTGATGGCATCAGAGAGCCAGTTGCAGGTT 189824 | ||||| ||||| || || || ||||| |||||||| || | || || ||| | || | Sbjct 1402 TCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGAT 1343 Query 189825 CACTTCTCTATGGTAACAACATCATTTCTGGTGCTGTTGTACCTTCATCAAATGCTATTG 189884 | ||||| || || ||||| || ||||| ||||| || | ||| | || ||||||| Sbjct 1342 CTCTTCTTTACGGAAACAATATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTG 1283 Query 189885 GTCTACACTTCTACCCAATCTGGGAAGCAGCAACAGTAGATGAGTGGCTTTACAATGGTG 189944 || | || || ||||| ||||||||||| ||| | || ||||| ||||| ||||| || | Sbjct 1282 GTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGCG 1223 Query 189945 GTCCTTACCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGAC 190004 ||||||| | | | | | ||||| | ||||| | | || ||||| | Sbjct 1222 GTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTG 1163 Query 190005 AGTGGGAATTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCAC 190064 |||||||| | | | | || |||||| | |||||||| |||||| |||||||| | Sbjct 1162 AGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTC 1103 Query 190065 CAGTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCATTCTCTG 190124 | || | || ||| ||| || ||| | | |||||| ||||||| || || |||| Sbjct 1102 CTGTTGCAGCTGCAACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTG 1043 Query 190125 ATGGTATGCCTTTAGGTATCTCAGGTACATTCAACTTCATGTTTGTATTCCAAGCAGAAC 190184 ||||||||||| |||| ||||| ||||| |||||||| ||| |||||||||| || || | Sbjct 1042 ATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGC 983 Query 190185 ATAATATCCTTATGCACCCATTCCATATGGCAGGTGTAGCAGGTATGTTTGGTGGAGCAT 190244 | || || |||||||||||||| || ||| ||||||||| ||| | || || || | Sbjct 982 ACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCC 923 Query 190245 TATTCTCTGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAAACAACTGGTT 190304 |||| ||| ||||||||||| | ||||| ||| | | ||||| ||||| || | Sbjct 922 TATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAA 863 Query 190305 TAGAGTCACAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACATACAACATAGTAG 190364 || || || | |||||||| || ||||||||||||||||| |||||||| |||| Sbjct 862 ATGAATCTGCTAATGAAGGTTACAAATTCGGACAAGAAGAAGAAACTTACAACATTGTAG 803 Query 190365 CTGCTCATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAA 190424 ||||||||||||| ||||| || | |||||||| |||||| |||||||| || | Sbjct 802 CTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTT 743 Query 190425 GTTTACACTTCTTCTTAGCAGTATTCCCTGTAACCTGTGTATGGTTAACATCAATGGGTA 190484 |||||| ||||||||||| | | || ||| || | ||||| || | | |||| Sbjct 742 CTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTA 683 Query 190485 TTTGCACAATGGCATTCAACTTAAATGGTTTCAACTTTAACCAGTCTGTAGTTGATGCAC 190544 || |||| ||||| |||||| ||||||||||||| || ||||| || ||||||||| | Sbjct 682 TTAGCACCATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTC 623 Query 190545 AAGGTAAAATTGTTCCAACATGGGGCGATGTTCTTAACAGAGCAAACCTTGGTATGGAAG 190604 |||| || || || |||| ||| || ||||| | || |||||||||||||||| Sbjct 622 AAGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAG 563 Query 190605 TAATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCTTGTGCTGAGTCTACA 190663 | ||||||||| | ||||| ||||||||||| |||||||||||| || |||| || || Sbjct 562 TTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAGGCTCCA 504 Score = 392 bits (434), Expect = 4e-104 Identities = 708/1039 (68%), Gaps = 21/1039 (2%) Strand=Plus/Plus Query 190796 TTTGATGTGCTTGATGACTGGTTAAAACGTGATAGATTTGTATTCATAGGTTGGTCTGGT 190855 |||||| | | |||||||||||| | || | || || || |||||||||||||| Sbjct 32404 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 32463 Query 190856 CTTATATTATTACCATGTGCTTTCCTATCAATTGGTGGTTGGTTCACAGGAACTACATTT 190915 || | | || || ||||| | | | | || |||||||||||||| || || ||| Sbjct 32464 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 32523 Query 190916 GTTACTAGTTGGTATACACATGGAATTGCATCTTCATACCTTGAAGGAGCAAACTTTTTG 190975 || ||| |||||||| |||||| | || ||| || | ||||| || ||||| Sbjct 32524 GTAACTTCATGGTATACTCATGGATTGGCTAGTTCCTATTTAGAAGGTTGCAATTTTTTA 32583 Query 190976 ACAGCAGCAGTATCCACACCTGGTGATGCTATGGGTCATAGTTTATTATTCTTATGGGGT 191035 || || || || || || |||| | || | | | ||| ||| || || | |||||| Sbjct 32584 ACCGCTGCCGTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 32643 Query 191036 CCAGAGGCACAAGGTTCATTTGTTCGTTGGTTACAAATTGGTGGACTTTGGAACTTTGTA 191095 || || |||||||| ||| |||||||| ||| | || || || ||| ||||| Sbjct 32644 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGGCTTTTGTT 32703 Query 191096 GCACTTCATGGTGTATTTGGTCTCATAGGATTCATGTTACGTCAGTTTGAAATTGCAGGA 191155 || || || || | || | | ||||| || ||||||||||| |||||| |||| || Sbjct 32704 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 32763 Query 191156 TTGGTGGGTATTAGACCTTACAATGCTCTTGCTTTTTCTGCTGTCATAGCAGTTTTCACA 191215 | || | ||||||| ||||| | || || |||| | || || ||||| Sbjct 32764 TCCGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTTGTT 32823 Query 191216 AGTGTATTCTTAATCTATCCACTTGGTCAGCACAGTTGGTTCTTTGCACCTTCATTTGGA 191275 ||| ||| |||| |||||||| ||||| ||||||||||||| ||| ||||| Sbjct 32824 TCTGTCTTCCTAATTTATCCACTGGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 32883 Query 191276 GTTGCAGCAATCTTTAGATATATTCTATTCATTCAAGGTTTCCACAATATTACACTCAAC 191335 || || || || ||| ||| || || || | ||||| || || ||| ||| | ||| Sbjct 32884 GTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 32943 Query 191336 CCTTTCCACATGATGGGAGTTGCAGGTATTCTAGGTGGAGCATTACTATGTGCCATTCAT 191395 || || || ||||||||||| || ||| | || || | || | ||||| || |||||| Sbjct 32944 CCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCCGCTCTGCTATGCGCTATTCAT 33003 Query 191396 GGTGCTACAGTACAGAACACCTTGTATGAGGACTCAAGCATCTATACAGATGGTCAAGTT 191455 |||||||| ||| | || || || | ||| ||||||| | | | Sbjct 33004 GGTGCTACTGTAGAAAATACTTTATTTGA------------------AGATGGTGATGGT 33045 Query 191456 CAAAGTACAACCTTTAGAGCATTTGATCCAACACAGGATGAGGAAACTTATTCTATGATC 191515 || |||| || | || ||| | ||||| || | ||| ||||||||||| ||| || Sbjct 33046 GCAAATACA---TTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTC 33102 Query 191516 ACTGCAAACAGATTCTGGTCACAGATATTTGGTATTGCATTCTCTAACAAAAGATTTCTA 191575 || || ||| | || |||||||| || ||||| |||| || || || ||| | | || Sbjct 33103 ACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 33162 Query 191576 CACTTCTTGATGTTGTTTGTTCCTGTAATGGGAATGTGGACATCATCAATAGGTATTGTA 191635 || ||||| ||||| ||||| || |||| || | |||| | | || | || Sbjct 33163 CATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTC 33222 Query 191636 GGTCTTGCACTTAACTTAAGAGCATATGATTTTGTATCTCAAGAGATAAGAGCAGCAGAA 191695 || || || | ||| || | || ||||| || || || || || || | ||||| ||| Sbjct 33223 GGCCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAA 33282 Query 191696 GACCCAGAGTTTGAAACCTTCTATACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCA 191755 || || || ||||| || ||||||||||| || |||||| | || |||||||| | || Sbjct 33283 GATCCGGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 33342 Query 191756 TGGATGTCTTCAGTAGACCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTACCT 191815 |||||| | | ||| || |||||||| ||| || | ||||| ||||| |||||||| Sbjct 33343 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCA 33402 Query 191816 AGAGGAAATGCATTGTAAT 191834 | ||||| || | |||| Sbjct 33403 CGTGGAAACGCTCTTTAAT 33421 Score = 253 bits (280), Expect = 3e-62 Identities = 378/534 (71%), Gaps = 2/534 (0%) Strand=Plus/Minus Query 182847 TAGCAAAAGGACCTAAAACAACCACATGGATATGGAATTTACACGCAGATGCTCATGATT 182906 |||| || |||||| | || ||||| ||||| ||||| |||| || |||||||| |||| Sbjct 41354 TAGCTAAGGGACCTGATACTACCACTTGGATCTGGAACCTACATGCTGATGCTCACGATT 41295 Query 182907 TTGATAAGCATTCTAGTGATCTGCAAGAGAATTCAAGAAAAATATTTGCTGCACACTTTG 182966 |||||| ||| | |||||| || | || | || ||||| ||||| ||| || || | Sbjct 41294 TTGATAGTCATACCAGTGATTTGGAGGAAATCTCTCGAAAAGTATTTAGTGCTCATTTCG 41235 Query 182967 CTCATCTAGGTATCATCTTTGTATGGATGAGCAGTTTCTTCTTTCAAGGTGCTAGGTTTT 183026 || || |||||||||| | ||| |||| | | | || || |||||| | |||| Sbjct 41234 GCCAACTCTCTATCATCTTTCTTTGGCTGAGTGGCATGTATTTCCACGGTGCTCGTTTTT 41175 Query 183027 CAAACTATACAGGATGGTTGGCAGACCCAACTCATGTAAAACCTGGTGCTCAAGTGGTTT 183086 | || ||| || |||| || || || ||||| | |||| ||||||| ||||||| Sbjct 41174 CCAATTATGAAGCATGGCTGAGTGATCCTACTCACATTGGACCTAGTGCTCAGGTGGTTT 41115 Query 183087 GGCCTATACTTGGTCAAGAGATATTGAATGGAGATCAGGGTGCAGGATATCAAGGTATTA 183146 |||| ||| | || ||||| || ||||||||||| ||| | ||| | | ||| || Sbjct 41114 GGCCAATAGTGGGCCAAGAAATCCTGAATGGAGATGTGGGCGGAGGCTTCCGAGGAATAC 41055 Query 183147 GAATTACATCTGGTTTATTTCAGATGTGGAGAGCATGGGGTATAACAAATGAAACTCAAC 183206 ||| || ||||| || |||||||| ||| |||||| || ||||| | |||| |||| Sbjct 41054 AAATAACCTCTGGCTTTTTTCAGATTTGGCGAGCATCTGGAATAACTAGTGAATTACAAC 40995 Query 183207 -TAATGGCGCTAGCACTAGGTGCTTTAGTTATGGCAGCAGTTATGTTTAATGCTGGTGCA 183265 | || | | ||| | || || || || | ||||| | ||| || ||||||| Sbjct 40994 TTTATTGTAC-CGCAATTGGCGCATTGGTCTTCGCAGCCTTAATGCTTTTTGCTGGTTGG 40936 Query 183266 TTTCATTTTCACGTTGCTGCTCCTAAGTTATCATGGTTTCAGAATGTAGAATCTATGATG 183325 || |||| |||| || ||||| || || | ||||| || |||||||||||||| || Sbjct 40935 TTCCATTATCACAAAGCAGCTCCAAAATTGGCTTGGTTCCAAGATGTAGAATCTATGTTG 40876 Query 183326 AATCATCACCTTGCAGGTTTGCTTGGTCTTGGTTCTTTAGGATGGGCAGGACAT 183379 ||||| || | ||||| | || || ||||| || | |||||||||||| Sbjct 40875 AATCACCATTTAGCAGGGCTACTAGGACTTGGGTCCCTTTCTTGGGCAGGACAT 40822 >seq217943 Length=18188 Score = 183 bits (202), Expect = 4e-41 Identities = 189/245 (77%), Gaps = 2/245 (1%) Strand=Plus/Plus Query 182486 ATGTCTCACGCCGTTAAAATATATGATACTTGCATTGGATGCACACAATGTGTGAAGGCT 182545 ||||| || |||| ||||| |||||||| || || ||||| || |||||||| || Sbjct 10714 ATGTCACATTCCGTAAAAATTTATGATACCTGTATAGGATGTACTCAATGTGTCCGAGCA 10773 Query 182546 TGTCCATTGGATGTATTAGAAATGGTTCCTTGGGATGGGTGCAAAGCAAAGCAAATTGCT 182605 || || ||| |||||||||||| | ||||||||||| || ||||| |||||||| ||| Sbjct 10774 TGCCCTACGGACGTATTAGAAATGATACCTTGGGATGGATGTAAAGCTAAGCAAATAGCT 10833 Query 182606 TCCTCACCTAGAACTGAGGATTGTGTAGGATGTAAGAGATGTGAAACAGCATGTCCTACA 182665 || | || ||||| ||||| ||||| || ||||||||||| ||| | || ||||| || Sbjct 10834 TCTGCTCCAAGAACCGAGGACTGTGTTGGTTGTAAGAGATGCGAATCCGCCTGTCCAACG 10893 Query 182666 GACTTTTTAAGTATTCGTGTTTACTTGGGTGCA-GAAACCACAAGAAGCATGGGTCTAGC 182724 || ||||| || | || ||||| || | ||| ||||| || |||| ||||||||||| Sbjct 10894 GATTTTTTGAGCGTCCGAGTTTATTTATG-GCATGAAACAACTCGAAGTATGGGTCTAGC 10952 Query 182725 ATATT 182729 |||| Sbjct 10953 TTATT 10957 Score = 174 bits (192), Expect = 2e-38 Identities = 247/344 (72%), Gaps = 10/344 (3%) Strand=Plus/Plus Query 188637 ACCTGTCACAGTTCAGTATCCTTATGAAAAATTAATACCCTCAGAGAGATATAGAGGGAG 188696 |||||| || |||| ||||| ||||||||||||||| | || || | | | | || | Sbjct 8652 ACCTGTAACTATTCAATATCCCTATGAAAAATTAATAACATCGGAACGTTTTCGCGGTCG 8711 Query 188697 GATACACTATGAGTTTGATAAATGTATTGCTTGTGAAGTATGTGTAAGAGTTTGTCCTAT 188756 || || | ||| |||||||||||||||||||||||||||||||| |||| |||||||| Sbjct 8712 CATCCATTTTGAATTTGATAAATGTATTGCTTGTGAAGTATGTGTTCGAGTATGTCCTAT 8771 Query 188757 TAATTTACCTGTAGTTGATTGGGTAATGAATAAACAAACTAAGAAGAAGGAAC---TTAG 188813 || | ||||| ||||||||| | || | || || | |||| || ||| | Sbjct 8772 AGATCTGCCTGTTGTTGATTGGAAATTGGA-AACTAATATTAGAAAAA--AACGATTGCT 8828 Query 188814 AAATTATTCAATTGACTTTGGTGCTTGCATTTTCTGTGGGAATTGTGTAGAATACTGTCC 188873 ||||| ||||| ||||| ||| || || ||||| |||||||| || || ||||| Sbjct 8829 TAATTACAGTATTGATTTTGGAATTTGTATATTTTGTGGTAATTGTGTTGAGTATTGTCC 8888 Query 188874 AACTAACTGTCTATCCATGACAGAAGAGTATGAACTATCTGTTTTTGACAGACATCAACT 188933 ||| || ||| | || ||||| ||||| |||||| | || || ||| | || || | Sbjct 8889 AACAAATTGTTTGTCAATGACTGAAGAATATGAATTTTCAACTTATGATCGTCACGAATT 8948 Query 188934 CAACTATGATAATGTAGCTCTTGGTAGATTACCTACCAATGTCA 188977 || ||| || | ||||| | ||| | | ||||||||||| Sbjct 8949 GAATTATAATCAAATAGCTTTGGGTCGTT----TACCAATGTCA 8988 >seq218717 Length=448 Score = 120 bits (132), Expect = 4e-22 Identities = 139/186 (75%), Gaps = 1/186 (1%) Strand=Plus/Minus Query 190025 CTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTAT-CTGCAGCATTTGC 190083 || |||||| | |||||||| |||||| |||||||| || || | | || || ||| Sbjct 193 CTGGGTATGCGTCCTTGGATTGTTGTTGCATATTCAGCTCCTGTTTGCAGCTGCTATTGT 134 Query 190084 AGTATTCCTTGTATACCCATTTGGTCAGGGTTCATTCTCTGATGGTATGCCTTTAGGTAT 190143 || ||| | | || ||| ||||||| || || | | ||||||||||| |||| || Sbjct 133 TGTTTTCTTGATTTATCCAATTGGTCAAGGAAGTTTTTTTAATGGTATGCCTCTAGGAAT 74 Query 190144 CTCAGGTACATTCAACTTCATGTTTGTATTCCAAGCAGAACATAATATCCTTATGCACCC 190203 ||| |||| |||||||| || |||||||||| || || || || || ||||||||||| Sbjct 73 CTCTTGTACTTTCAACTTTATTATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCC 14 Query 190204 ATTCCA 190209 ||| || Sbjct 13 ATTTCA 8 >seq24310 Length=38401 Score = 116 bits (128), Expect = 5e-21 Identities = 172/242 (71%), Gaps = 9/242 (4%) Strand=Plus/Minus Query 184712 TATGGTTTGCTATTTCTTGGAGCACATTTTGTATGGGCATTCAGTTTGATGTTCCTAT-- 184769 |||||| | | || || | || | |||||||||||| |||||||| ||||| |||| Sbjct 25949 TATGGTCTTTTTTTCCTAGATGCTCGTTTTGTATGGGCTTTCAGTTTCATGTTTCTATTC 25890 Query 184770 ----GGAGTGGTAGAGGATACTGGCAAGAGTTGATAGAGTCTATTGCTTGGGCACATAAC 184825 || ||||| | || |||||||| | || || || ||| |||||| ||||| Sbjct 25889 AGCGGGCGTGGTTATTGTTATTGGCAAGAACTTATTGAATCCGTTGTTTGGGCTCATAAT 25830 Query 184826 AAATTAAAACTTGCACCTACC-ATTCAACCAAGAGCAATGTCAATTACACAAGGACGTGC 184884 |||| |||| |||| ||| | | ||| | ||| || ||| |||||||||||| Sbjct 25829 AAATGAAAAGTTGCTCCTGGCTACTCAGCTGTCAGCCTTGAGCATTGTACAAGGACGTGC 25770 Query 184885 TGTTGGAGT--TGCACACTTCTTACTTGGAGGTATTGCCACAACATGGGCATTCTTCTTT 184942 ||| ||||| | || | | | || || || ||||||||||||||||| |||||||| Sbjct 25769 TGTAGGAGTAATCCATTATACCTTCTGGGTGGAATTGCCACAACATGGGCGTTCTTCTTA 25710 Query 184943 GC 184944 || Sbjct 25709 GC 25708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629318012152480