Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_028962.1 Length=140961 Score E Sequences producing significant alignments: (Bits) Value seq149378 95.1 1e-14 >seq149378 Length=35185 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/224 (71%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 15308 TATAAAATATAGGAGAGT-GAATTAAATGGCATCACAAGCTAAACAAACAGTCCATACTG 15366 || |||||| ||||| | | | || |||||| ||| || || ||||| || | || | Sbjct 32766 TACAAAATA-AGGAGGTTAGGACTATATGGCAACACTTGCAAAGCAAACGGTTGAAACCG 32824 Query 15367 GTAATACCGTATTGTTGT-AT-ATTAAAGGTAAACCAGTAGGAAGAGCACAATCAGCAAG 15424 |||| ||||||| | | || ||||| || | || | || |||||| || Sbjct 32825 GTAA--CCGTATTTATATCATGATTAAGAACGAAGTTATTGGTCGTGCTCAATCATTAAC 32882 Query 15425 TGGTAGACGTGAATACGGAACTACTGGTGTGTATGAAATTGGTTCAATCATGCCACAAGA 15484 |||| || || ||| || |||||||||||| ||||||||||||||||||| || Sbjct 32883 TGGTGACCGCTCATTCGGTACCCAAGGTGTGTATGAACTTGGTTCAATCATGCCACATGA 32942 Query 15485 ACACGTTTACTTAAAATATGAAGGTACGTTAACAGTAGAACGTT 15528 |||||| | |||||| ||| |||||| || |||| ||||||| Sbjct 32943 ACACGTATTCTTAAAGTATACGGGTACGGTATCAGTTGAACGTT 32986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449440878520480