Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_028982.1 Length=137918 Score E Sequences producing significant alignments: (Bits) Value seq158858 241 1e-58 >seq158858 Length=235449 Score = 241 bits (266), Expect = 1e-58 Identities = 286/385 (74%), Gaps = 2/385 (1%) Strand=Plus/Minus Query 74154 GATAACATATCAGTTGGTGGCAGAAACTTACTCTTAGGCTCTCAACA-GGACTTCAACAC 74212 ||||| | || || ||||| | ||| || | |||| || ||| | ||||||| || Sbjct 22269 GATAAGCTTTCTGTAGGTGGTAAGAACCTATTATTAGAATC-CAATATGGACTTCTCAAC 22211 Query 74213 TACAGACTATCTTATCAAGCAGTACACTTTATCTGAAAACTGGGTGATTGGTCAAGAGTA 74272 ||||| || ||||| ||| ||| | ||| || || | ||| | | ||| |||||||| Sbjct 22210 AACAGATTACCTTATTAAGATGTATAGTTTGTCCGAGGATTGGATTACTGGACAAGAGTA 22151 Query 74273 CACTTTCATGATTAAGGGTACTGTTCCAGCAGGTCAGAAGTTTGGTATATGGATGAATGG 74332 |||||| | || || || |||||||| ||||| || || |||||||||||| ||||| Sbjct 22150 CACTTTTGTTATCAAAGGAACTGTTCCTGCAGGACAAAAATTTGGTATATGGCAAAATGG 22091 Query 74333 TGGCTCTAATAACGTAGGTTATGCTACAACTGCCTATGCTAACGGAGTGACTTATGTTAC 74392 ||| || ||||| ||||| | || ||||| | |||| || ||||| |||||||| || Sbjct 22090 TGGTTCAAATAAAGTAGGGGAAGCCACAACAACATATGTGAATGGAGTAACTTATGTAAC 22031 Query 74393 CTTCAAAGCCATAGCTACTACATCCGGTAATGAGAAAGTAATTAACTTGTATAACTTCCC 74452 |||||||| |||||||| ||| | |||||||| | | | | | || ||||||| ||| Sbjct 22030 TTTCAAAGCAATAGCTACAACAACTGGTAATGAAAGAAAACTAAGTTTATATAACTACCC 21971 Query 74453 AAGCAACACTACAGCTTCCACAGTAGATTGGGTTGCATTATATAAAGGTAACAAGCCTAT 74512 || || ||| ||||| |||||||||||||| |||| ||||| || ||||| || Sbjct 21970 TCAAAATACCACACTATCCACTGTAGATTGGGTTGCCCTATACAAAGGAAATAAGCCAAT 21911 Query 74513 GGACTGGACACCTGCGCCTGAAGAT 74537 ||||||| | ||||| || |||||| Sbjct 21910 GGACTGGTCTCCTGCTCCGGAAGAT 21886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 439735805512640