Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_028983.1 Length=138877 Score E Sequences producing significant alignments: (Bits) Value seq158858 251 6e-62 >seq158858 Length=235449 Score = 251 bits (278), Expect = 6e-62 Identities = 283/376 (75%), Gaps = 2/376 (1%) Strand=Plus/Minus Query 74899 TCAGTCGGTGGCAGAAACTTACTCTTAGGTTCTCAACA-GGACTTCAACACTACAGACTA 74957 || || ||||| | ||| || | |||| || ||| | ||||||| || ||||| || Sbjct 22260 TCTGTAGGTGGTAAGAACCTATTATTAGAATC-CAATATGGACTTCTCAACAACAGATTA 22202 Query 74958 TCTTATCAAGCAGTATACCTTATCTGAAAACTGGGTGACGGGTCAAGAGTATACTTTCAT 75017 ||||| ||| ||||| || || || | ||| | || || |||||||| ||||| | Sbjct 22201 CCTTATTAAGATGTATAGTTTGTCCGAGGATTGGATTACTGGACAAGAGTACACTTTTGT 22142 Query 75018 GATTAAGGGTACTGTTCCAGCAGGTCAGAAGTTTGGTATATGGATGAATGGTGGCTCTAA 75077 || || || |||||||| ||||| || || |||||||||||| |||||||| || || Sbjct 22141 TATCAAAGGAACTGTTCCTGCAGGACAAAAATTTGGTATATGGCAAAATGGTGGTTCAAA 22082 Query 75078 TAACGTAGGATATGCTACAACTGCCTATGCTAACGGAGTAACTTATGTTACATTCAAAGC 75137 ||| ||||| | || ||||| | |||| || |||||||||||||| || |||||||| Sbjct 22081 TAAAGTAGGGGAAGCCACAACAACATATGTGAATGGAGTAACTTATGTAACTTTCAAAGC 22022 Query 75138 CATAGCTACTACATCGGGTAATGAAAAAGTAATTAACTTGTATAACTTCCCAAGCAACAC 75197 |||||||| ||| | |||||||||| | | | | || ||||||| ||| || || Sbjct 22021 AATAGCTACAACAACTGGTAATGAAAGAAAACTAAGTTTATATAACTACCCTCAAAATAC 21962 Query 75198 TACAGCTTCCACAGTAGATTGGGTTGCATTATACAAAGGTAACAAGCCTATGGACTGGAC 75257 ||| ||||| |||||||||||||| |||||||||| || ||||| ||||||||| | Sbjct 21961 CACACTATCCACTGTAGATTGGGTTGCCCTATACAAAGGAAATAAGCCAATGGACTGGTC 21902 Query 75258 TCCTGCACCTGAAGAT 75273 |||||| || |||||| Sbjct 21901 TCCTGCTCCGGAAGAT 21886 Score = 89.7 bits (98), Expect = 5e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 34592 TATGAAGGTGAACTGGAAATTGGAGACTGGTCGGTAAA-ACCAGAGACCGTAGGGTCAAT 34650 ||||||||||||||||||||||||||||| |||||| | |||| |||| |||||||| Sbjct 164034 TATGAAGGTGAACTGGAAATTGGAGACTGACTGGTAAAGAGAAGAGGCCGTGGGGTCAAT 164093 Query 34651 TCCCTACCACCTTC 34664 |||| ||||||||| Sbjct 164094 TCCCCACCACCTTC 164107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 442794354646560