Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_029084.1 Length=37990 Score E Sequences producing significant alignments: (Bits) Value seq158858 132 1e-26 >seq158858 Length=235449 Score = 132 bits (146), Expect = 1e-26 Identities = 181/253 (72%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 14233 CAAGTAAATATGGCATCAAATGTCCGAACAAGATGACACCAAAATATATTACGTTTCACA 14292 |||| ||||| ||||| ||||| | |||| | || | || ||||| | || | Sbjct 160013 CAAGCAAATACCCAATCAAGTGTCCTTATTCTATGAAAGCAGAGTACATTACAGTGCATA 160072 Query 14293 ATACGGCTAATGATGCGCCTGCAGAAAATGAGATCCGTTATATGATCGGTAACAATAACG 14352 | || ||||||||||||||| | || ||| | ||| |||||||| || | ||||| Sbjct 160073 ACACTTATAATGATGCGCCTGCTAAGAACGAGGTAAATTACATGATCGGAAATACTAACG 160132 Query 14353 AGGTTTCGTTCCACGTTGCTGTGGACGATAAGGAAGCAGTTCAGGGAATTCCTTTTGATC 14412 ||||||| |||||| | || || || |||| |||| |||| || ||||| |||||| Sbjct 160133 AGGTTTCATTCCACTTCGCAGTAGATGATATCGAAGTTATTCAAGGTATTCCGGTTGATC 160192 Query 14413 GAAACGCCTGGCATTGCGGAGATGGAAACGGAACAGGAAACCGTCAATCCATCGGCGTAG 14472 | || || |||||||| || ||||| || | |||||||| |||| ||||| || | Sbjct 160193 GTAATGCTTGGCATTGTGGTGATGGTGGTGGTAACGGAAACCGAAAATCTATCGGTGTTG 160252 Query 14473 AGATTTGTTATTC 14485 | || ||||| || Sbjct 160253 AAATCTGTTACTC 160265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121061010191872