Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_030240.1
Length=128058
Score E
Sequences producing significant alignments: (Bits) Value
seq54724 86.0 5e-12
seq210337 82.4 6e-11
>seq54724
Length=7877
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 101027 AACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCT 101086
||||||| ||| | ||| || ||||| ||||||||||| ||||||| |||| || ||
Sbjct 2086 AACACCAAGTGAAGAGTAGACTCTTTCTGAATATTGTAGTCGGCCAGAGTTCTGCCGTCC 2027
Query 101087 TCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCG 101146
|| | ||| || || ||| | || | || || ||||| || | |||||||||||
Sbjct 2026 TCGAGTTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCCGGAGGGATACCTTCTTTGTCC 1967
Query 101147 GCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTT 101206
|| || |||||| | | | | || |||| | | |||| |||||| |||
Sbjct 1966 TGGATCTTGGCTTTCACGTTGTCGATGGTGTCTGAGCTCTCAACCTCGAGGGTAATGGTT 1907
Query 101207 TTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238
|| || ||||| || || | ||| || |||||
Sbjct 1906 TTACCGGTCAAGGTCTTGACAAAGATCTGCAT 1875
>seq210337
Length=1863
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCC 101089
|||| || | ||| |||||||| |||||||||||||| |||| ||| ||| ||
Sbjct 376 ACCAAATGAAGAGTCGATTCTTTCTGAATATTGTAATCCGCCAAAGTCCGACCATCCTCA 435
Query 101090 AATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCA 101149
| ||||| || || | || || || |||||||| || | ||||||||||| |
Sbjct 436 AGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCTTTGTCCTGA 495
Query 101150 ATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTG 101209
||||| ||||||| | | || || | | | || | ||||||||| |||
Sbjct 496 ATTTTAGCCTTCACATTATCAATAGTGTCCGAGCTCTCAACCTCCAAGGTAATAGTCTTG 555
Query 101210 CCCGTCAATGTTTTAATAAAAATTTGCATT 101239
|| ||||| || || | ||| |||||||||
Sbjct 556 CCTGTCAAAGTCTTCACAAAGATTTGCATT 585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408326599808052
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |