Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq146431 145 6e-30
>seq146431
Length=15796
Score = 145 bits (160), Expect = 6e-30
Identities = 416/624 (67%), Gaps = 13/624 (2%)
Strand=Plus/Plus
Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604
||||| || |||||||| || ||||||||||||| |||| ||||||||| || |||
Sbjct 4125 AAACAAGCGAAATCACAGTGTAAACCTTCGTCTCGTGAGATCAATTCGTTAGAGAAGGTT 4184
Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664
||||| ||||| | || | || |||||||| || || | || || || |||
Sbjct 4185 AATCCAGGCATGAGTCCACGTTTCTTAAGCCAGAAAATCGAACAGAAGCTACCTGAGAAG 4244
Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCT 4724
|| || ||||| || || || ||||| | ||| | || || | | | |
Sbjct 4245 AAGATACCTTCAACACAAGCGAAAGCTACGATTCGTTCAGCAAA--AGTTTGAGATC-CA 4301
Query 4725 TTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCG 4784
| ||||| | | ||||| | |||||| || ||| || |||||||| | | |||
Sbjct 4302 TCGATCCAAGTCATAGCCCATTGAGCTTTCTTAGCAACACAAGGAATTGTTTCGACTGCG 4361
Query 4785 TTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATAC 4844
|||| | | | | || |||| || ||||| || | || || ||||||
Sbjct 4362 CGGAATAGATGATCTCTCTCTTTGTTATCTTTGATGTAAGTATCGAGTAAGAGACTATAC 4421
Query 4845 ATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAA-GCATCTAGCTTCTGT 4903
|| |||||||| ||||| || || || || ||||||||||| || ||| | ||||| |
Sbjct 4422 ATCTCAGAATGGATATTCTCAATCGCGATTTGAAATCCGTAGAATGCA-CGCGCTTCGGA 4480
Query 4904 TACTTGAACTTCGTTACAA-AATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGG 4962
||||| || || | ||| |||| | | |||||| || || |||||| |
Sbjct 4481 GACTTGTACATC-TGACATGAATCGAGAAGCGAGATTTTCGAGGACGATTCCGTCAGATG 4539
Query 4963 CTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGC-TTAAGTTTTTTC 5021
| || || || || | || || || |||| |||| || | | || || |||| |
Sbjct 4540 CGGCGAAGAAGGCGAGGACGTGTTTGATGAAGTGACGTTC-TCCGTCGTTGAGATTTTCC 4598
Query 5022 CAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCT 5081
|||| | |||| | || ||| |||||||| | ||||| || || ||||| |||
Sbjct 4599 CAGTCACGTCCGTCTTGTGATAGATCTACTTCTTCGGCGGTCCAGAAGGATGCTTCGGCT 4658
Query 5082 TTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACA-AATCTGTT-GT 5139
|| |||||||| ||| || | || || |||||||||| || ||| ||||||| |
Sbjct 4659 TTCTTGTACATCTCCCAGATCTGTGGGTAGTGAATCGGAAACAT-ACAGAATCTGTCCGG 4717
Query 5140 CGTTAGGTGTAAGAAGCGGTTCTT 5163
||| || ||||||||||| ||||
Sbjct 4718 CGTC-GGAGTAAGAAGCGGCTCTT 4740
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425658767246924
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |