Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_030929.1 Length=49033 Score E Sequences producing significant alignments: (Bits) Value seq247535 91.5 5e-14 >seq247535 Length=13588 Score = 91.5 bits (100), Expect = 5e-14 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 30370 GTCATGTGCCAACGCCGCCAGAAATCTTGAATATCAAGCGCCTTGTAGGGCGAGTTGAAG 30429 ||||| |||||||| | ||| |||||||||||| | || || || || ||| ||| Sbjct 2489 GTCATATGCCAACGTCTCCAAAAATCTTGAATACTTAACGATTTATATGGAGAGAAGAAA 2548 Query 30430 TTTATTGGGAGCCAAATGTTAAAGAGAAGGGCCGCGCCTATGGCCATGTCGCAGTAACCG 30489 || ||||| | |||| || || | || || || ||||| ||||| || || || || Sbjct 2549 TTAATTGGCAATGAAATATTGAATAACAGTGCAGCACCTATTGCCATATCACAATATCCA 2608 Query 30490 CTAAAGTCAAAGTATAGTTGGAATGTGTAGGAAAG 30524 ||||| ||||| || ||||| ||||| || | ||| Sbjct 2609 CTAAAATCAAAATACAGTTGTAATGTATAAGCAAG 2643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156286472237320