Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_030934.1 Length=90552 Score E Sequences producing significant alignments: (Bits) Value seq139237 84.2 1e-11 >seq139237 Length=87585 Score = 84.2 bits (92), Expect = 1e-11 Identities = 85/107 (79%), Gaps = 4/107 (4%) Strand=Plus/Minus Query 72298 TGAATTGCTGGAAACCCCTTAGAG-CTTGACGAACTACAACGTGGATGGTAACATCGAAC 72356 ||||||||||||| || |||||| ||||| | || ||||||||| ||| ||| ||| | Sbjct 42621 TGAATTGCTGGAACTCCTTTAGAGCCTTGATGTACGACAACGTGGCTGGAAACGGCGAGC 42562 Query 72357 GTGAATGT--TAAAAATCGTC-AGGATTGGGCAATCAGCAGGTAAGC 72400 |||| || | |||| |||| |||||||| |||||||||| |||| Sbjct 42561 GTGACCGTTCTGAAAAACGTCAAGGATTGGACAATCAGCAGCCAAGC 42515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 288698283289404