Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value seq125822 93.3 6e-14 >seq125822 Length=25115 Score = 93.3 bits (102), Expect = 6e-14 Identities = 173/250 (69%), Gaps = 8/250 (3%) Strand=Plus/Plus Query 99201 AAGACCGTACGGGAACCGGTAC--CCTGTCTATTTTCGGGCACCAGATGCGTTTCAATCT 99258 ||||||| ||||||||||| || || | ||| || || || |||||||| ||| | | Sbjct 7761 AAGACCGCACGGGAACCGGAACGACCAG--TATCTTTGGTCATCAGATGCGGTTCCCTTT 7818 Query 99259 GCAAGAAGGCTTTCCGCTGGTAACGACTAAGCGCTGTCACATGCGTTCGATTATTCACGA 99318 ||| || || |||||| |||| ||||| || | || ||| |||||||| || || Sbjct 7819 GCAGGATGGATTTCCGATGGTGACGACGAAAAAATTACATATGAAGTCGATTATCCATGA 7878 Query 99319 ACTGCTGTGGTTCCTGAAAGGCGATACCA--ATGTCAAATATTTAAATGATAATGGTGTA 99376 || | ||||| | || || |||| || ||| || || || || || || || Sbjct 7879 GTTGATTTGGTTTATCTCGGGTGACACCAACATTTCATATCTTCAA--GAAAACGGCGTC 7936 Query 99377 ACTATTTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGTAAACAG 99436 |||||| |||| ||| | || |||| || | ||||||||||| || || ||| Sbjct 7937 CGGATTTGGAACGAGTGGGCGGACGAAGACGGGAATCTCGGACCGGTTTATGGCGCCCAG 7996 Query 99437 TGGCGGTCTT 99446 ||||| |||| Sbjct 7997 TGGCGTTCTT 8006 Score = 89.7 bits (98), Expect = 7e-13 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 99852 AGTTATCGTGTCAGCTTTATCAACGCAGCGCCGATGTGTTCTTAGGGGTGCCGTTTAATA 99911 |||| ||||| |||||||| ||||| |||||||| || ||||| || || ||||||| Sbjct 8178 AGTTGTCGTGCCAGCTTTACCAACGGTCTGCCGATGTCTTTTTAGGTGTTCCATTTAATA 8237 Query 99912 TTGCGTCATACGCTTTGTTGATCCACATGTTTGCACA 99948 |||| || ||||||||| ||| |||||| |||| || Sbjct 8238 TTGCTTCTTACGCTTTGCTGACGCACATGATTGCTCA 8274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 714070759477600