Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_031043.1 Length=229501 Score E Sequences producing significant alignments: (Bits) Value seq214244 86.0 9e-12 >seq214244 Length=1107 Score = 86.0 bits (94), Expect = 9e-12 Identities = 161/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 99525 GACCGTACTGGCACTGGTACGTTGTCTCTGTTTGGGCATCAAATGCGTTTTAATTTGGCT 99584 || |||||||| || || || |||||| | ||||| ||||| ||| |||||||| Sbjct 712 GATCGTACTGGTACAGGCACTTTGTCTATTTTTGGTCATCATATGAAATTTAATTTAAAA 653 Query 99585 GAAGGTTTTCCTCTGGTCACTACTAAGCGCTGTCACCTCCGTTCTATTATTCATGAACTC 99644 |||| |||||||| || || || || ||||| | | |||||||| || ||||| Sbjct 652 AAAGGATTTCCTCTTGTTACCACAAAAAAATGTCATATTCCATCTATTATACACGAACTA 593 Query 99645 CTTTGGTTCCTGAAAGGGGATACCAATACCCAGTACCTGAAAGATAACGGCGTCACTATC 99704 | ||||| | ||||| ||||| || | | || || || | || | ||||| Sbjct 592 TTATGGTTTTTAAAAGGTGATACTAACATTAAATATCTTAATCAAAATAAAATATCTATC 533 Query 99705 TGGAATGAGTGGGAAAACGAGAACGGTGACTTAGGACCGGTATACGGAAAGCAGTGG 99761 |||||| | |||| | | || | || || | || || |||| ||||| || ||| Sbjct 532 TGGAATAATTGGGCAGATGAACAAGGAGAAGTTGGTCCAATATATGGAAAACAATGG 476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731822463835680