Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_031055.1 Length=43773 Score E Sequences producing significant alignments: (Bits) Value seq123612 881 0.0 seq255890 785 0.0 seq41419 255 2e-63 seq158858 158 3e-34 >seq123612 Length=52173 Score = 881 bits (976), Expect = 0.0 Identities = 1733/2536 (68%), Gaps = 70/2536 (3%) Strand=Plus/Minus Query 25739 GGGTTTTCTAATTTTGTTTATAAAGGAGAGAGGGA-AATGGAAAATGGATACGAGGTTAT 25797 ||| ||| | ||||||||||| | || |||| | |||| | ||| || ||| |||| Sbjct 49551 GGGATTTTGAGTTTTGTTTATA--GTAG-GAGGAACAATGAATAATTCTTATGAGATTAT 49495 Query 25798 CGGAAATAAAATAAAGTTTTATTTAAATCAAGATCTAACAAAGGGGTGGAATCAAATTCC 25857 || ||| |||| || | |||||| | | |||||||| | || ||||| | || || Sbjct 49494 TGGTAATCAAATTAAATATTATTTGAGGGATGATCTAACGAGAGGATGGAACAACATACC 49435 Query 25858 GAAGCCTAAGTTTAGAAACATGCAAGAAATAAATGAATGGTGTGGAAGTTCTGCTAATGA 25917 | | | ||| |||| || ||||||| | ||||||||||||||||| | || || Sbjct 49434 TAGTCTGCAATTTCGAAATGTGAAAGAAATTACAGAATGGTGTGGAAGTTCAACAAACGA 49375 Query 25918 GATAGTTTGTCAATGGGATGCACTAAATCAAAATGCAATGAGTACATCGGAAACAACGGA 25977 || | || |||||||| || ||||||||||||||||||||| |||| ||||| || Sbjct 49374 AATTATGTGCGGGTGGGATGCGCTCAATCAAAATGCAATGAGTACAACGGATACAACAGA 49315 Query 25978 TTTTTTATATAGGTGGATGAGTTGGTATGTAACCAAACCCTTAGACACCACAGCAGCCGA 26037 ||| |||||||||||||| ||||||||| | || |||| |||| || |||||| || Sbjct 49314 TTTCTTATATAGGTGGATTAGTTGGTATCTGACTGAACCATTAGGCAGTACAGCACAAGA 49255 Query 26038 AATAAGGAAGTTACCGGATGAGTTAGCGGTATTCATTACGAATGTTCCATTCGATGCAAT 26097 ||| | ||||| | || || | ||| ||||| || |||| || | |||||| | Sbjct 49254 AATGCGAAAGTTGCTAGACGAACTTGCGAGTTTCATAACACATGTACCTGTTGATGCATT 49195 Query 26098 TGACCTATTAAAGCGCACGTCTCAGATGGTTTTAGAGTGTGTATGTTTGATGTT------ 26151 ||| || | ||| || ||||| ||||| ||||| ||| ||||||| | || Sbjct 49194 TGAACTCATTAAGAATACCTCTCATATGGTGTTAGATTGTATATGTTTTGTTTTGGACTG 49135 Query 26152 --TA--AAAT--GTT--CG--------TGTGAAGGAGTGGTCTTATGTTTAGGAAAAAGG 26195 || |||| ||| || | | ||||| || ||| | | | ||| | Sbjct 49134 GATACCAAATTTGTTAACGATATTCTTTTTTTAGGAGGGGAAACATGCTAAAGCGAAAAG 49075 Query 26196 AAATCATACCGTTTCGTGATTTTATGAACGGATCATTTAAAAAGCAGCAGAAGCAAACAA 26255 ||| || | |||| | |||||| || ||| | ||| ||| | |||||||||| Sbjct 49074 AAACAATTTCTTTTCAAGCCTTTATGGACCAATCTTATAAGAAGAAA---AAGCAAACAA 49018 Query 26256 AATTATTAAGCATTGAGCCAATCAGTCCAATAGCGTTTTTCCATATGGCACAACCCCTTG 26315 || ||| ||||||| || || |||||| | || ||||| |||||| || ||| ||| Sbjct 49017 AAATATATAGCATTGGCCCTATTAGTCCATTCGCATTTTTTCATATGTCATCACCACTTA 48958 Query 26316 TACACACTTATGTAGCACTTGGCATACTTGGCGGACTAACGATTGGAGCTGTTTTATTGG 26375 | || || |||||||| || || ||| | ||||| || || |||||||||||||| |||| Sbjct 48957 TTCATACGTATGTAGCCCTGGGAATAGTAGGCGGCCTTACAATTGGAGCTGTTTTGTTGG 48898 Query 26376 AAAGATATCTGGTTCAAAATGACCGGATTACAGCAGGTAAATTAGTATCAGATGGACTGT 26435 ||| ||| | || | |||||| || ||| || | | || |||| |||| Sbjct 48897 AAAAATACTTAGTACGAAATGATTATGTTTTTGCATCCAATCTCCTTTCTAATGGTCTGT 48838 Query 26436 ATCACGGACTTCGGATAGGTAGCATTGGTTTTATTGTATATGTGTTCATTCGAGTTGTAA 26495 || |||| | | || || | ||||| || |||| |||| ||| ||||| || || Sbjct 48837 ATTACGGTGTAAGAATTGGAGGGATTGGGTTCATTGGTTATGCGTTTATTCGCATTTTAC 48778 Query 26496 GGATGTTTTAAAGGGAGGGTATGAATGTGATGAAGGAATGGTTTCATAA-AAGAGCTATA 26554 ||||| ||| ||||||| | ||||| | |||||| | || || | |||| Sbjct 48777 TCATGTTATAA--GGAGGGTTACTA----ATGAAAGGATGGTTAAAAAAGAAAAAATATA 48724 Query 26555 AAGAATCTTTTAATTGAGGTATTCaaaaaaaGTGGTATTTACTATGAACACCAAACAAGA 26614 || | || ||| || ||||| || ||| | || |||| ||| ||| || Sbjct 48723 AATA-TCAGTTAGAAGAAGTATTTAAGAAAGCGAAGCTATATGATGAGCACATGACACGA 48665 Query 26615 GGAGGTAAATTACCTGTTTTCCCGAAAATCCATCATGTTCTAGAAACAAAAGATTCTGTC 26674 || || || | || ||| || | || ||| |||| ||| ||| || ||| Sbjct 48664 GGTGGAAAGGTCCCCATTTATCCTACGATTCATGATGTATACGAAGGAAAGGAAAGTGTA 48605 Query 26675 CGATATACATTTACTTTACCAAACGGGGTAGATCC-GCAAACGATTGAGAAGAAATGGTT 26733 || || || ||||| |||| || || || ||||| || | ||| | ||||||||||| Sbjct 48604 CGGTACACTTTTACACTACCTAATGGCGTTGATCCAGCTCAA-ATTCATAAGAAATGGTT 48546 Query 26734 TTGCTTTCAGCAAATCTTAGGGAGGGAACTGGCGATTGAAGGAGATATAAAACGCTTTGT 26793 || ||||||||||| |||| | || ||| ||||| ||| ||| || || Sbjct 48545 CTGTTTTCAGCAAATACTAGGTGAAAATCTAATGATGGAAGGTACTATTAAAAAGTTCGT 48486 Query 26794 ATTGCAC-TCGTTCAAACATAAT---AGCTTACAACCGTACTTGTATAACTATTCAGATT 26849 | | || | |||| | |||| || ||||| || ||| || | ||| | | | Sbjct 48485 ACTCCATGTATTTCATTC-TAATGCAAGTTTACAGCCTTACGATTACAGTTATAAACAAT 48427 Query 26850 GGTTACCACATCTAAAAGGACATAGCATCCCTGTAGTGGTAGGAAAGGACCAATTTGGAA 26909 || |||| ||||| || | | ||||| || |||||| ||||||||| |||| Sbjct 48426 GGCAACCATTATTAAAACCGTATCGTCTTCCTGTGGTAGTAGGACGGGACCAATTCGGAA 48367 Query 26910 AGTGGATTGTATATGATATGACGGATTCGAATAGCCCACACTTATTAATAGCGGGAGAAA 26969 | ||||| ||||||||| ||||| |||| || || ||| |||| |||||||||| Sbjct 48366 ATACAATTGTGTATGATATGGTTGATTCAAATACACCTCATTTACTAATTGCGGGAGAAA 48307 Query 26970 CAGGAAGTGGTAAAAGTAGTATGGTACGCGTTATTTTATCTACATTGATTCAACATTTGC 27029 ||||||| || |||||||||||||| ||||| |||||| | ||||| || |||||| || Sbjct 48306 CAGGAAGCGGAAAAAGTAGTATGGTGCGCGTAATTTTAGCCACATTAATCCAACATATGT 48247 Query 27030 CACCAGAATCATTACAGCTGTATTTAGGTGATTTGAAGAACTCAGAATTTCACTTTTTAA 27089 ||||||| ||||| |||| | || ||||| || || ||||| ||||| ||||||| Sbjct 48246 CACCAGAGCATTTACATTTGTACCTGGGGGATTTAAAAAATTCAGAGTTTCATTTTTTAA 48187 Query 27090 GAAGAGTGCAACACGTTAAAAAAGTTTGCATGGAAGAAGTAGAAATGG-AGGTAATGTTA 27148 |||||||| | ||||| || | ||||||||||||||| |||||| | ||| ||||| Sbjct 48186 GAAGAGTGAAGCACGTAAAGTATGTTTGCATGGAAGAACATGAAATGACAAGTA-TGTTA 48128 Query 27149 AACCAATTGTGGATGGAAATTATCAAAAGACGTAAGTGTATGGAGAAATATGAAGTAGAC 27208 ||||||||| || | | | ||| | |||| ||||| ||||||| | | Sbjct 48127 TCAAAATTGTGGAAAGAGGTATTGCATAGAAGAAAGTTAATGGAAGAATATGAGCTGGGT 48068 Query 27209 CACGTTAACGAATACAACAAAGTGACTACAGAGGAAAAATTACCGTATATTTTAATTTGC 27268 || || | |||||||| || | || | ||| || ||||| |||||||| ||| | Sbjct 48067 CATATTGATGAATACAATCAAATAACAAAAGATAAACCCTTACCCTATATTTTTATTGCC 48008 Query 27269 ATTGATGAGGTTGCGATGTTGGAAGATGAAAACGATAGTATGAAAATTATTAGAAAGATA 27328 |||||||| || || ||| | | || ||||| || || | | || || ||| ||| Sbjct 48007 ATTGATGAAGTAGCAATGCTACAGGACGAAAAGGAATGTGTCACCATAATAGAAAAAATA 47948 Query 27329 TCAGCTGTCGGGCGATCATTAGGCGTATTTTTAATGTTATCGATGCAGCGGCCGGATGCA 27388 ||||||||||| |||| | || | || | ||| || ||||| || || |||||| Sbjct 47947 TCAGCTGTCGGCAGATCGCTTGGTATCTTCCTCATGCTAAGTATGCAACGTCCAGATGCA 47888 Query 27389 ACCGTTATCGATGGGAAATTAAAAGTGAATATGACAGTCAGAATGGGGTTCCAGTGTGAT 27448 | | | ||||| || ||||| | ||| |||| || |||||||| || | |||| Sbjct 47887 AAAATACTGGATGGTAAGTTAAAGCTCAATTTGACGGTAAGAATGGGCTTTAAATGTG-- 47830 Query 27449 TCATCGTTAAAT-GCAGGA--ATTATAGGTACACCAGGTTCAGAACTGTTAGAGCAATCC 27505 || |||| | ||| | ||| | || || || || |||||| ||| ||||| Sbjct 47829 -CAGACTTAATTAACAGTAACATTGTGGGGACGCCTGGATCAGAAAATTTAAGTCAATCG 47771 Query 27506 GGGCAAATGATTTTCAAATTAAAAGGACTAAAGAAAGTGCAAGCTCCAGAGTTAAAGTTA 27565 || ||||||||||| |||||| | || |||| || ||||| ||||| || || Sbjct 47770 GGCCAAATGATTTTAAAATTAGATGGTTTAAAAAAGGTGCAGGCTCCTTTTTTGGCATTG 47711 Query 27566 GAAAAAGCAAAGAAATTAGTGGCTCCTTTCAGAATGACAAAAGAAATAGAAGTAAGTACT 27625 || | ||||| || || | | || | | | | ||||| | |||| | Sbjct 47710 GACCAGGCAAAAGAAATAATAGAACCGTATCGTTTATCTAAAGAGCAAAGTGTAAAGAAG 47651 Query 27626 GAAGTGAAAGAG----GAGCCTTTA-----TTTGGGGTGTTAGATGATG---AGGAATAG 27673 |||| | |||| ||| || ||||||||||||||||||| | |||||| Sbjct 47650 GAAGAGTCAGAGTATCGAGAAGATAAAATCTTTGGGGTGTTAGATGATGCTAACGAATAG 47591 Query 27674 AGATATGGCTATTTTGAAGAATTTGACTA-AATTTCGTTGTATGTCACGGGACGACATTG 27732 ||||| || | || | | || || | ||||| | |||||||| || || || ||| Sbjct 47590 AGATA-AGCAAATTATATGCCATTTACAACAATTTAGATGTATGTCGCGTGATGATATTA 47532 Query 27733 TGGAATTACACTTCAGCCATTTGAAAAACCCAATAACATCATGCAATACGGTATTAAAAA 27792 | || | || || || || | ||||| || |||||| || ||||| || ||| Sbjct 47531 TTGATCTTCATTTTAGAAATGTTAAAAATGCAGTAACATGCTGTAATACTGTTACAAAGC 47472 Query 27793 GATTACGTAGAGATGGACATGTGGAAGTGAATACTACATTCCAGCCATATGTGTATTTTC 27852 ||||| | | || ||| || | || || |||| || | ||||| |||||||||| Sbjct 47471 GATTAAGCCGCGAAGGATATATTGATGTAGATACATCACAACGTCCATACGTGTATTTTC 47412 Query 27853 CACAACCAAGCGCAATTAGAAAAACAAGTCAAAAAATACCACATTTCTTAGGCATAGTAG 27912 | | |||| | ||| | ||| ||| ||||| |||| ||||| |||| || |||| Sbjct 47411 CTTATCCAAATACCATTCGTAAAGGAAGCCAAAAGATACGTCATTTTTTAGCGATTGTAG 47352 Query 27913 ATGCGTATAAACAATTGATCCAAAATGAGAAACCTAAGATTTTTAAAGTAGAACCGAAGT 27972 ||| ||||| || || | | || || | ||| ||||| ||| |||||||||| |||| Sbjct 47351 ATGTATATAAGCAGTTATTACGAACCGAAAGACCGAAGATATTTCAAGTAGAACCTAAGT 47292 Query 27973 ATGGAAAAGAATATATGGAACCTGACATATTTACGATTTGGCGAAAAGCTCCTTTCTTTA 28032 || |||| ||||||||||| || |||||||| |||||||| ||| ||| || |||| Sbjct 47291 ATAAGAAAGGTTATATGGAACCCGATATATTTACCATTTGGCGTAAAAGTCCATTTTTTA 47232 Query 28033 TAGAAGTACAAAAATCAATATATAGTAAATCTGTTATGCAAGAGAAAATAAAACGGTATG 28092 ||||||| || || || || |||| ||| || || ||| |||||||||||| |||| Sbjct 47231 TAGAAGTCCAGAACTCCATCTATAATAAGGCTACGATCCAAACGAAAATAAAACGTTATG 47172 Query 28093 AAATGTATTTTTACAGTATGAAGTGGCAAGAAGAATCATGGCAGCCATCCAACaaaaaa- 28151 || ||||||| || ||| | ||| || ||||||| ||||| ||| |||| || | Sbjct 47171 AATCGTATTTTCGTAGCATGGAATGGAAAAAAGAATCGTGGCAACCA--AAACATAATAT 47114 Query 28152 -aTATTCCCCTCAATTTTAATCCTTACTGATAGAAAATATGAAGTCTCCAGTTCAAATTT 28210 |||| ||||| |||||||||||||||| |||||| | |||| ||||| || || Sbjct 47113 GGTATTTCCCTCTCTTTTAATCCTTACTGACCTCAAATATCCAATCTCTAGTTCTAACTT 47054 Query 28211 CCGCATATTTCAAGCG 28226 || || ||||||||| Sbjct 47053 TCGTATTTTTCAAGCG 47038 >seq255890 Length=19928 Score = 785 bits (870), Expect = 0.0 Identities = 1277/1821 (70%), Gaps = 43/1821 (2%) Strand=Plus/Plus Query 26348 GGACTAACGA---TTGGAGCTGTTTTATTGGAAAGATATCTGGTTCAAAATGACCGGATT 26404 ||| |||||| |||||| | || || |||| |||| || ||||||| | || Sbjct 17021 GGAGTAACGACAATTGGAGGGGCGTTGTTAGAAAAGCATCTTGTGAAAAATGATCATGTT 17080 Query 26405 ACAGCAGGTAAATTAGTATCAGATGGACTGTATCACGGACTTCGGATAGGTAGCATTGGT 26464 |||||| ||| | || |||||| | ||| | ||| | |||||||| | || || Sbjct 17081 GCAGCAGCGAAACTTTTAAGTGATGGAATATATTATGGAATGAGGATAGGTGGAGTTTGT 17140 Query 26465 TTTATTGTATATGTGTTCATTCGAGTTGTAAGGATGTTTTAAAGGGAGGGTATGA-ATGT 26523 || |||| ||||| ||||||| | |||| ||||||||| |||||| || | ||| Sbjct 17141 TTCATTGGTTATGTATTCATTCAAATTGTGGAGATGTTTTA--GGGAGGAAATTACATGG 17198 Query 26524 GA----TGAAGGAATGGTTTCATAAAAGAGCTATAAAGAATCTTTTAATTGAGGTATTCa 26579 | | ||||| ||| |||||||| | | | ||||||| | || |||||||| Sbjct 17199 GGATTTTAAAGGATTGGCTTCATAAACAAAGTTTGAAGAATCGACTTATAGAGGTATTTG 17258 Query 26580 aaaaaaGTGGTATTTACTATGAACACCAAACAAGAGGAGGTAAATTACCTGTTTTCCCGA 26639 ||| ||| | || || || ||||||||||| || ||| |||| ||| ||||| Sbjct 17259 TAAAGGCAGGTTTATATGTAGACCATCAAACAAGAGGTGGAAAAGTACCCATTTACCCGA 17318 Query 26640 AAATCCAT--CATGTT---CTAGAAACAAAAGATTCTGTCCGATATACATTTACTTTACC 26694 | || ||| ||| || || |||| ||||| ||| |||| | |||||| | || Sbjct 17319 AGATACATGACATTTTTTCCTCGAAAGAAAAGGTTC-----GATACATATTTACCATTCC 17373 Query 26695 AAACGGGGTAGATCCGCAAACGATTGAGAAGAAATGGTTTTGCTTTCAGCAAATCTTAGG 26754 |||||| |||||||| ||| ||||| ||||| |||||||||||||| ||||| ||||| Sbjct 17374 AAACGGATTAGATCCGAAAAACATTGAAAAGAAGTGGTTTTGCTTTCAACAAATATTAGG 17433 Query 26755 GAGGGAACTGGCGATTGAAGGAGATATAAAACGCTTTGTATTGCACTCGTT-CAAAC--A 26811 | | | | || |||||||| ||||| ||| | |||||| | | ||| || | | Sbjct 17434 GCGTAATGTAGCAATTGAAGGTGATATTAAAAGGTTTGTACTTAATGTGTTTCATTCGGA 17493 Query 26812 TAATAGCTTACAACCGTACTTGTATAACTATTCAGATTGGTTACCACATCTAAAAGGACA 26871 | | | ||||| | ||| || | ||| | ||| |||| || | | ||| Sbjct 17494 TGCTGGGCTACAAGCATACAATTACAGTTATAAGAAGTGGCAACCATTACTTATACAACA 17553 Query 26872 T-AGCATCCCTGTAGTGGTAGGAAAGGACCAATTTGGAAAGTGGATTGTATATGATATGA 26930 | | | |||| ||| | ||||| |||||||||||||| |||| ||||| |||| Sbjct 17554 TCATCTTCCC-GTAATTGTAGGGCGTGACCAATTTGGAAATATGATTACGTATGACATGA 17612 Query 26931 CGGATTCGAATAGCCCACACTTATTAATAGCGGGAGAAACAGGAAGTGGTAAAAGTAGTA 26990 | ||| || | || || | |||| || ||||| ||||| || || |||||||||| Sbjct 17613 TTGCTTCAAACACGCCGCATCTTCTAATTGCAGGAGAGACAGGGAGCGGAAAAAGTAGTA 17672 Query 26991 TGGTACGCGTTATTTTATCTACATTGATTCAACATTTGCCACCAGAATCATTACAGCTGT 27050 ||||||||||| | | || ||| | |||||| || || | || || |||||| ||| Sbjct 17673 TGGTACGCGTTGTACTGTCCACACTCATTCAATATATGTCTCCTGATAAATTACATTTGT 17732 Query 27051 ATTTAGGTGATTTGAAGAACTCAGAATTTCACTTTTTAAGAAGAGTGCAACACGTTAAAA 27110 | | |||||||||||||| || |||||||| || || |||| ||| ||||||| ||| Sbjct 17733 ACCTGGGTGATTTGAAGAATTCCGAATTTCATTTCTTGCGAAGGGTGAAACACGTAAAAG 17792 Query 27111 AAGTTTGCATGGAAGAAGTAGAAATGGAGGTAATGTTAAACCAATTGTGGATGGAAATTA 27170 | ||||||||||||||| |||||||| || | ||| | | || |||||| |||||| Sbjct 17793 AGGTTTGCATGGAAGAAATAGAAATGAAGATTATGCTGCAGAAAGTGTGGAAGGAAATAC 17852 Query 27171 TCAAAAGACGTAAGTGTATGGAGAAATATGAAGTAGACCACGTTAACGAATACAACAAAG 27230 | || | | || | ||||| | ||||||||||| || || |||||||||||||| Sbjct 17853 GCGAACGTAGAAAATTGATGGAAGAGTATGAAGTAGATCATATTGACGAATACAACAAAT 17912 Query 27231 TGACTACAGAGGAAAAATTACCGTATATTTTAATTTGCATTGATGAGGTTGCGATGTTGG 27290 | | | | || | | ||| ||||| ||| || || || || || | |||||| Sbjct 17913 TAAATCCTGATAATCAGAAACCATATATCTTACTTGCTATCGACGAAGTGGTCATGTTGC 17972 Query 27291 AAGATGAAAACGATAGTATGAAAATTATTAGAAAGATATCAGCTGTCGGGCGATCATTAG 27350 |||||||||| || ||||| || || ||| ||||| || ||||| | || | | Sbjct 17973 AAGATGAAAAAGAATGTATGTCTATAGTTGAAAAAATATCGGCAGTCGGAAGGGCACTTG 18032 Query 27351 GCGTATTTTTAATGTTATCGATGCAGCGGCCGGATGCAACCGTTATCGATGGGAAATTAA 27410 | || ||||||||| || ||||| || || ||||||| || | ||||| || |||| Sbjct 18033 GAGTTTTTTTAATGCTAAGTATGCAACGCCCTGATGCAAAAGTACTGGATGGTAAGTTAA 18092 Query 27411 AAGTGAATATGACAGTCAGAATGGGGTTCCAGTGTGATTCATCGTTAAATGCAGGA--AT 27468 | | |||||||| || |||||||| || | |||||| | | || ||| | || Sbjct 18093 AGCTCAATATGACGGTTAGAATGGGCTTTAAATGTGATAGTACAATTAA--CAGTAATAT 18150 Query 27469 TATAGGTACACCAGGTTCAGAACTGTTAGAGCAATCCGGGCAAATGATTTTCAAATTAAA 27528 ||| ||||| || |||||||||| || |||||||| || |||||||| || || ||||| Sbjct 18151 TATGGGTACTCCTGGTTCAGAACGCTTGGAGCAATCTGGCCAAATGATATTAAAGTTAAA 18210 Query 27529 AGGACTAAAGAAAGTGCAAGCTCCAGAGTTAAAGTTAGAAAAAGCAAAGAAATTAGTGGC 27588 ||| |||||||||| ||| |||| | ||| | ||| ||||| ||||| |||| | Sbjct 18211 TGGATTAAAGAAAGTACAATCTCCTTATTTAGAATTAAGTAAAGCCAAGAAGATAGTTGA 18270 Query 27589 TCCT-------TTCAGAATGACAAAAGAAA-TAGAAGTAAGTA-CTGAAGTGAAAGAGGA 27639 ||| ||| ||| || || | ||| | | | | || | ||| |||| | Sbjct 18271 ACCTTATCGCGTTCCGAAAGAGAATATAAAGTTGCAAAACCTACCACAAG---AAGAAAA 18327 Query 27640 GCCTTTATTTGGGGTGTTAGATGATGAGGAATAGAGATATGGCTATTTTGAAGAATTTGA 27699 | ||||| |||||||||||| |||||||||||||| | || || | || ||||||| Sbjct 18328 TCAATTATTCGGGGTGTTAGATTATGAGGAATAGAGACAAAGCCATACTAAACAATTTGA 18387 Query 27700 CTAAATTTCGTTGTATGTCACGGGACGACATTGTGGAATTACA-CTTCAGCCATTTGAAA 27758 ||| | |||||||| || || |||||| | || || || |||| | || || Sbjct 18388 AGCTTTTTAGATGTATGTCTCGTGATGACATTATTGATTTGCATTTTCAAGGA-TTAAAG 18446 Query 27759 AACCCAATAACATCATGCAATACGGTATTAAAAAGATTACGTAGAGATGGACATGTGGAA 27818 ||| | | |||| || |||||||| | || ||||| | |||||||| |||||||| Sbjct 18447 AACGCGGTTACATGCTGTAATACGGTGATGAAGCGATTAAGAAGAGATGGTCATGTGGAT 18506 Query 27819 GTGAATACTACATTCCAGCCATATGTGTATTTTCCACAACCAAGCGCAATTAGAAAAACA 27878 | |||| | |||||||| | || || || ||| | ||| || || | ||||| Sbjct 18507 GCCAATATCTCGCAACAGCCATACATTTACTTCCCTCAATCCAGCACACTTCGCAAAACT 18566 Query 27879 AGTCAAAAAATACCACATTTCTTAGGCATAGTAGATGCGTATAAACAATTGATCCAAAAT 27938 || ||||| || || || || |||||||| |||||| |||||||| | ||| | || Sbjct 18567 AGCCAAAAGATTCCCCACTTTCTAGGCATATTAGATGTATATAAACAGCTTATCTATTAT 18626 Query 27939 GAGAAACCTAAGATTTTTAAAGTAGAACCGAAGTATGGAAAAGAATATATGGAACCTGAC 27998 || |||||||| | |||||||| || || ||||| || ||||||| ||||||||||| Sbjct 18627 GAAAAACCTAAACTGTTTAAAGTGGAGCCAAAGTACGGTAAAGAATTCATGGAACCTGAT 18686 Query 27999 ATATTTACGATTTGGCGAAAAGCTCCTTTCTTTATAGAAGTACAAAAATCAATATATAGT 28058 |||||| |||||||| | | |||| ||||| || ||||| || | ||| | || || Sbjct 18687 GCATTTACAATTTGGCGTAGATCTCCATTCTTCATTGAAGTCCAGAGGTCAGTTTACAGC 18746 Query 28059 AAATCTGTTATGCAAGAGAAAATAAAACGGTATGAAATGTATTTTTACAGTATGAAGTGG 28118 ||| ||||||||||| |||||||| |||||||| | || || ||||| | | ||| Sbjct 18747 AAAAAAGTTATGCAAGATAAAATAAATAGGTATGAATTATACTTCCACAGTCAGGAATGG 18806 Query 28119 CAAGAAGAATCATGGCAGCCA 28139 || | ||||| ||||||||| Sbjct 18807 CATAACGAATCTTGGCAGCCA 18827 Score = 87.8 bits (96), Expect = 5e-13 Identities = 80/97 (82%), Gaps = 8/97 (8%) Strand=Plus/Plus Query 39637 AAAGAGCAGCTAGCAAAAGCTAACTGCTC-----AGGTAAT-GGAGAAAGATTACCATGT 39690 ||| |||||||||||| |||||||||||| ||| ||| |||||||||| ||||||| Sbjct 1946 AAAAAGCAGCTAGCAATAGCTAACTGCTCATATAAGGGAATCGGAGAAAGATAACCATGT 2005 Query 39691 CATCTATAGTATTGACGGAATATTGAG-TTTTATTCA 39726 || ||| |||| |||||||||| || ||||||||| Sbjct 2006 -GTCCATATTATTAACGGAATATTAAGTTTTTATTCA 2041 >seq41419 Length=13203 Score = 255 bits (282), Expect = 2e-63 Identities = 185/213 (87%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 35610 TGGATAGTGGCTACCGTGGAGAGGTTGG-GGTGCTGGTTGATAACACTGAAAGACCAATA 35668 ||||||||||||| ||||||| |||||| |||| |||| ||||||||||||||||||||| Sbjct 1804 TGGATAGTGGCTATCGTGGAGCGGTTGGAGGTGTTGGTAGATAACACTGAAAGACCAATA 1745 Query 35669 AGTTTAAATATGCAAGCTCATGTGATTGAAAAAGGAACACGTATTGCTCAAGGCGTCATA 35728 |||||||||||| |||||||||| || ||||||| ||||| || ||||||||||||||| Sbjct 1744 AGTTTAAATATGAAAGCTCATGTAATCAAAAAAGGTACACGCATCGCTCAAGGCGTCATA 1685 Query 35729 GCGCCAGTGGTAACAGCTCATTTCGTTGAAGTGGAAGAACTATCGGTTAGTGAACGTGGC 35788 ||| |||| |||||||||||||| ||||| ||||| || |||| |||||||||||| || Sbjct 1684 GCGTCAGTAGTAACAGCTCATTTTGTTGAGGTGGACGAGCTATTGGTTAGTGAACGAGGT 1625 Query 35789 GTTGGGGGCTTTGGATCTACAGGTACTAAATAA 35821 ||||| || |||| |||||| || || || ||| Sbjct 1624 GTTGGCGGATTTGAATCTACGGGAACGAAGTAA 1592 >seq158858 Length=235449 Score = 158 bits (174), Expect = 3e-34 Identities = 234/332 (70%), Gaps = 0/332 (0%) Strand=Plus/Minus Query 18602 AACATTTTATTAAAATCAAATGTTAAATATGAAAAAACAGACTATCTAATCAATCAATAT 18661 ||| | |||||| |||| ||| | | | || |||||| || || || || ||| Sbjct 22245 AACCTATTATTAGAATCCAATATGGACTTCTCAACAACAGATTACCTTATTAAGATGTAT 22186 Query 18662 ACTCTAACTGAAAATTTCTTTGCGGGTGAAGAGTATACCTTTGTAATTAAAGGGAGTGTC 18721 | | | | || ||| || | || ||||||| || ||||| || ||||| | ||| Sbjct 22185 AGTTTGTCCGAGGATTGGATTACTGGACAAGAGTACACTTTTGTTATCAAAGGAACTGTT 22126 Query 18722 CCACAAGGACAGAAATTTGGAATTTGGCAGAATGGTGGGTCTAGCAATGTTGGATATGCA 18781 || |||||| |||||||| || ||||| |||||||| || | || || || | || Sbjct 22125 CCTGCAGGACAAAAATTTGGTATATGGCAAAATGGTGGTTCAAATAAAGTAGGGGAAGCC 22066 Query 18782 ACAAGTGTTTACGCGAATGGAATAACTTATGTAACCTTCAAAGCAGTTGCAGCTACAAGT 18841 |||| || | ||||||| ||||||||||||| ||||||||| | || | |||| | Sbjct 22065 ACAACAACATATGTGAATGGAGTAACTTATGTAACTTTCAAAGCAATAGCTACAACAACT 22006 Query 18842 GGGAATGAACGAAAATTAAGCTTATATAACTATCCGAGTAGCACTACGAAATCTATTGTG 18901 || |||||| ||||| |||| ||||||||||| || | || || ||| | ||| Sbjct 22005 GGTAATGAAAGAAAACTAAGTTTATATAACTACCCTCAAAATACCACACTATCCACTGTA 21946 Query 18902 GAATGGGTGGCCTTGTATAAAGGGAATAAGCC 18933 || ||||| ||| | || ||||| |||||||| Sbjct 21945 GATTGGGTTGCCCTATACAAAGGAAATAAGCC 21914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139507885769960