Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_031055.1
Length=43773
Score E
Sequences producing significant alignments: (Bits) Value
seq123612 881 0.0
seq255890 785 0.0
seq41419 255 2e-63
seq158858 158 3e-34
>seq123612
Length=52173
Score = 881 bits (976), Expect = 0.0
Identities = 1733/2536 (68%), Gaps = 70/2536 (3%)
Strand=Plus/Minus
Query 25739 GGGTTTTCTAATTTTGTTTATAAAGGAGAGAGGGA-AATGGAAAATGGATACGAGGTTAT 25797
||| ||| | ||||||||||| | || |||| | |||| | ||| || ||| ||||
Sbjct 49551 GGGATTTTGAGTTTTGTTTATA--GTAG-GAGGAACAATGAATAATTCTTATGAGATTAT 49495
Query 25798 CGGAAATAAAATAAAGTTTTATTTAAATCAAGATCTAACAAAGGGGTGGAATCAAATTCC 25857
|| ||| |||| || | |||||| | | |||||||| | || ||||| | || ||
Sbjct 49494 TGGTAATCAAATTAAATATTATTTGAGGGATGATCTAACGAGAGGATGGAACAACATACC 49435
Query 25858 GAAGCCTAAGTTTAGAAACATGCAAGAAATAAATGAATGGTGTGGAAGTTCTGCTAATGA 25917
| | | ||| |||| || ||||||| | ||||||||||||||||| | || ||
Sbjct 49434 TAGTCTGCAATTTCGAAATGTGAAAGAAATTACAGAATGGTGTGGAAGTTCAACAAACGA 49375
Query 25918 GATAGTTTGTCAATGGGATGCACTAAATCAAAATGCAATGAGTACATCGGAAACAACGGA 25977
|| | || |||||||| || ||||||||||||||||||||| |||| ||||| ||
Sbjct 49374 AATTATGTGCGGGTGGGATGCGCTCAATCAAAATGCAATGAGTACAACGGATACAACAGA 49315
Query 25978 TTTTTTATATAGGTGGATGAGTTGGTATGTAACCAAACCCTTAGACACCACAGCAGCCGA 26037
||| |||||||||||||| ||||||||| | || |||| |||| || |||||| ||
Sbjct 49314 TTTCTTATATAGGTGGATTAGTTGGTATCTGACTGAACCATTAGGCAGTACAGCACAAGA 49255
Query 26038 AATAAGGAAGTTACCGGATGAGTTAGCGGTATTCATTACGAATGTTCCATTCGATGCAAT 26097
||| | ||||| | || || | ||| ||||| || |||| || | |||||| |
Sbjct 49254 AATGCGAAAGTTGCTAGACGAACTTGCGAGTTTCATAACACATGTACCTGTTGATGCATT 49195
Query 26098 TGACCTATTAAAGCGCACGTCTCAGATGGTTTTAGAGTGTGTATGTTTGATGTT------ 26151
||| || | ||| || ||||| ||||| ||||| ||| ||||||| | ||
Sbjct 49194 TGAACTCATTAAGAATACCTCTCATATGGTGTTAGATTGTATATGTTTTGTTTTGGACTG 49135
Query 26152 --TA--AAAT--GTT--CG--------TGTGAAGGAGTGGTCTTATGTTTAGGAAAAAGG 26195
|| |||| ||| || | | ||||| || ||| | | | ||| |
Sbjct 49134 GATACCAAATTTGTTAACGATATTCTTTTTTTAGGAGGGGAAACATGCTAAAGCGAAAAG 49075
Query 26196 AAATCATACCGTTTCGTGATTTTATGAACGGATCATTTAAAAAGCAGCAGAAGCAAACAA 26255
||| || | |||| | |||||| || ||| | ||| ||| | ||||||||||
Sbjct 49074 AAACAATTTCTTTTCAAGCCTTTATGGACCAATCTTATAAGAAGAAA---AAGCAAACAA 49018
Query 26256 AATTATTAAGCATTGAGCCAATCAGTCCAATAGCGTTTTTCCATATGGCACAACCCCTTG 26315
|| ||| ||||||| || || |||||| | || ||||| |||||| || ||| |||
Sbjct 49017 AAATATATAGCATTGGCCCTATTAGTCCATTCGCATTTTTTCATATGTCATCACCACTTA 48958
Query 26316 TACACACTTATGTAGCACTTGGCATACTTGGCGGACTAACGATTGGAGCTGTTTTATTGG 26375
| || || |||||||| || || ||| | ||||| || || |||||||||||||| ||||
Sbjct 48957 TTCATACGTATGTAGCCCTGGGAATAGTAGGCGGCCTTACAATTGGAGCTGTTTTGTTGG 48898
Query 26376 AAAGATATCTGGTTCAAAATGACCGGATTACAGCAGGTAAATTAGTATCAGATGGACTGT 26435
||| ||| | || | |||||| || ||| || | | || |||| ||||
Sbjct 48897 AAAAATACTTAGTACGAAATGATTATGTTTTTGCATCCAATCTCCTTTCTAATGGTCTGT 48838
Query 26436 ATCACGGACTTCGGATAGGTAGCATTGGTTTTATTGTATATGTGTTCATTCGAGTTGTAA 26495
|| |||| | | || || | ||||| || |||| |||| ||| ||||| || ||
Sbjct 48837 ATTACGGTGTAAGAATTGGAGGGATTGGGTTCATTGGTTATGCGTTTATTCGCATTTTAC 48778
Query 26496 GGATGTTTTAAAGGGAGGGTATGAATGTGATGAAGGAATGGTTTCATAA-AAGAGCTATA 26554
||||| ||| ||||||| | ||||| | |||||| | || || | ||||
Sbjct 48777 TCATGTTATAA--GGAGGGTTACTA----ATGAAAGGATGGTTAAAAAAGAAAAAATATA 48724
Query 26555 AAGAATCTTTTAATTGAGGTATTCaaaaaaaGTGGTATTTACTATGAACACCAAACAAGA 26614
|| | || ||| || ||||| || ||| | || |||| ||| ||| ||
Sbjct 48723 AATA-TCAGTTAGAAGAAGTATTTAAGAAAGCGAAGCTATATGATGAGCACATGACACGA 48665
Query 26615 GGAGGTAAATTACCTGTTTTCCCGAAAATCCATCATGTTCTAGAAACAAAAGATTCTGTC 26674
|| || || | || ||| || | || ||| |||| ||| ||| || |||
Sbjct 48664 GGTGGAAAGGTCCCCATTTATCCTACGATTCATGATGTATACGAAGGAAAGGAAAGTGTA 48605
Query 26675 CGATATACATTTACTTTACCAAACGGGGTAGATCC-GCAAACGATTGAGAAGAAATGGTT 26733
|| || || ||||| |||| || || || ||||| || | ||| | |||||||||||
Sbjct 48604 CGGTACACTTTTACACTACCTAATGGCGTTGATCCAGCTCAA-ATTCATAAGAAATGGTT 48546
Query 26734 TTGCTTTCAGCAAATCTTAGGGAGGGAACTGGCGATTGAAGGAGATATAAAACGCTTTGT 26793
|| ||||||||||| |||| | || ||| ||||| ||| ||| || ||
Sbjct 48545 CTGTTTTCAGCAAATACTAGGTGAAAATCTAATGATGGAAGGTACTATTAAAAAGTTCGT 48486
Query 26794 ATTGCAC-TCGTTCAAACATAAT---AGCTTACAACCGTACTTGTATAACTATTCAGATT 26849
| | || | |||| | |||| || ||||| || ||| || | ||| | | |
Sbjct 48485 ACTCCATGTATTTCATTC-TAATGCAAGTTTACAGCCTTACGATTACAGTTATAAACAAT 48427
Query 26850 GGTTACCACATCTAAAAGGACATAGCATCCCTGTAGTGGTAGGAAAGGACCAATTTGGAA 26909
|| |||| ||||| || | | ||||| || |||||| ||||||||| ||||
Sbjct 48426 GGCAACCATTATTAAAACCGTATCGTCTTCCTGTGGTAGTAGGACGGGACCAATTCGGAA 48367
Query 26910 AGTGGATTGTATATGATATGACGGATTCGAATAGCCCACACTTATTAATAGCGGGAGAAA 26969
| ||||| ||||||||| ||||| |||| || || ||| |||| ||||||||||
Sbjct 48366 ATACAATTGTGTATGATATGGTTGATTCAAATACACCTCATTTACTAATTGCGGGAGAAA 48307
Query 26970 CAGGAAGTGGTAAAAGTAGTATGGTACGCGTTATTTTATCTACATTGATTCAACATTTGC 27029
||||||| || |||||||||||||| ||||| |||||| | ||||| || |||||| ||
Sbjct 48306 CAGGAAGCGGAAAAAGTAGTATGGTGCGCGTAATTTTAGCCACATTAATCCAACATATGT 48247
Query 27030 CACCAGAATCATTACAGCTGTATTTAGGTGATTTGAAGAACTCAGAATTTCACTTTTTAA 27089
||||||| ||||| |||| | || ||||| || || ||||| ||||| |||||||
Sbjct 48246 CACCAGAGCATTTACATTTGTACCTGGGGGATTTAAAAAATTCAGAGTTTCATTTTTTAA 48187
Query 27090 GAAGAGTGCAACACGTTAAAAAAGTTTGCATGGAAGAAGTAGAAATGG-AGGTAATGTTA 27148
|||||||| | ||||| || | ||||||||||||||| |||||| | ||| |||||
Sbjct 48186 GAAGAGTGAAGCACGTAAAGTATGTTTGCATGGAAGAACATGAAATGACAAGTA-TGTTA 48128
Query 27149 AACCAATTGTGGATGGAAATTATCAAAAGACGTAAGTGTATGGAGAAATATGAAGTAGAC 27208
||||||||| || | | | ||| | |||| ||||| ||||||| | |
Sbjct 48127 TCAAAATTGTGGAAAGAGGTATTGCATAGAAGAAAGTTAATGGAAGAATATGAGCTGGGT 48068
Query 27209 CACGTTAACGAATACAACAAAGTGACTACAGAGGAAAAATTACCGTATATTTTAATTTGC 27268
|| || | |||||||| || | || | ||| || ||||| |||||||| ||| |
Sbjct 48067 CATATTGATGAATACAATCAAATAACAAAAGATAAACCCTTACCCTATATTTTTATTGCC 48008
Query 27269 ATTGATGAGGTTGCGATGTTGGAAGATGAAAACGATAGTATGAAAATTATTAGAAAGATA 27328
|||||||| || || ||| | | || ||||| || || | | || || ||| |||
Sbjct 48007 ATTGATGAAGTAGCAATGCTACAGGACGAAAAGGAATGTGTCACCATAATAGAAAAAATA 47948
Query 27329 TCAGCTGTCGGGCGATCATTAGGCGTATTTTTAATGTTATCGATGCAGCGGCCGGATGCA 27388
||||||||||| |||| | || | || | ||| || ||||| || || ||||||
Sbjct 47947 TCAGCTGTCGGCAGATCGCTTGGTATCTTCCTCATGCTAAGTATGCAACGTCCAGATGCA 47888
Query 27389 ACCGTTATCGATGGGAAATTAAAAGTGAATATGACAGTCAGAATGGGGTTCCAGTGTGAT 27448
| | | ||||| || ||||| | ||| |||| || |||||||| || | ||||
Sbjct 47887 AAAATACTGGATGGTAAGTTAAAGCTCAATTTGACGGTAAGAATGGGCTTTAAATGTG-- 47830
Query 27449 TCATCGTTAAAT-GCAGGA--ATTATAGGTACACCAGGTTCAGAACTGTTAGAGCAATCC 27505
|| |||| | ||| | ||| | || || || || |||||| ||| |||||
Sbjct 47829 -CAGACTTAATTAACAGTAACATTGTGGGGACGCCTGGATCAGAAAATTTAAGTCAATCG 47771
Query 27506 GGGCAAATGATTTTCAAATTAAAAGGACTAAAGAAAGTGCAAGCTCCAGAGTTAAAGTTA 27565
|| ||||||||||| |||||| | || |||| || ||||| ||||| || ||
Sbjct 47770 GGCCAAATGATTTTAAAATTAGATGGTTTAAAAAAGGTGCAGGCTCCTTTTTTGGCATTG 47711
Query 27566 GAAAAAGCAAAGAAATTAGTGGCTCCTTTCAGAATGACAAAAGAAATAGAAGTAAGTACT 27625
|| | ||||| || || | | || | | | | ||||| | |||| |
Sbjct 47710 GACCAGGCAAAAGAAATAATAGAACCGTATCGTTTATCTAAAGAGCAAAGTGTAAAGAAG 47651
Query 27626 GAAGTGAAAGAG----GAGCCTTTA-----TTTGGGGTGTTAGATGATG---AGGAATAG 27673
|||| | |||| ||| || ||||||||||||||||||| | ||||||
Sbjct 47650 GAAGAGTCAGAGTATCGAGAAGATAAAATCTTTGGGGTGTTAGATGATGCTAACGAATAG 47591
Query 27674 AGATATGGCTATTTTGAAGAATTTGACTA-AATTTCGTTGTATGTCACGGGACGACATTG 27732
||||| || | || | | || || | ||||| | |||||||| || || || |||
Sbjct 47590 AGATA-AGCAAATTATATGCCATTTACAACAATTTAGATGTATGTCGCGTGATGATATTA 47532
Query 27733 TGGAATTACACTTCAGCCATTTGAAAAACCCAATAACATCATGCAATACGGTATTAAAAA 27792
| || | || || || || | ||||| || |||||| || ||||| || |||
Sbjct 47531 TTGATCTTCATTTTAGAAATGTTAAAAATGCAGTAACATGCTGTAATACTGTTACAAAGC 47472
Query 27793 GATTACGTAGAGATGGACATGTGGAAGTGAATACTACATTCCAGCCATATGTGTATTTTC 27852
||||| | | || ||| || | || || |||| || | ||||| ||||||||||
Sbjct 47471 GATTAAGCCGCGAAGGATATATTGATGTAGATACATCACAACGTCCATACGTGTATTTTC 47412
Query 27853 CACAACCAAGCGCAATTAGAAAAACAAGTCAAAAAATACCACATTTCTTAGGCATAGTAG 27912
| | |||| | ||| | ||| ||| ||||| |||| ||||| |||| || ||||
Sbjct 47411 CTTATCCAAATACCATTCGTAAAGGAAGCCAAAAGATACGTCATTTTTTAGCGATTGTAG 47352
Query 27913 ATGCGTATAAACAATTGATCCAAAATGAGAAACCTAAGATTTTTAAAGTAGAACCGAAGT 27972
||| ||||| || || | | || || | ||| ||||| ||| |||||||||| ||||
Sbjct 47351 ATGTATATAAGCAGTTATTACGAACCGAAAGACCGAAGATATTTCAAGTAGAACCTAAGT 47292
Query 27973 ATGGAAAAGAATATATGGAACCTGACATATTTACGATTTGGCGAAAAGCTCCTTTCTTTA 28032
|| |||| ||||||||||| || |||||||| |||||||| ||| ||| || ||||
Sbjct 47291 ATAAGAAAGGTTATATGGAACCCGATATATTTACCATTTGGCGTAAAAGTCCATTTTTTA 47232
Query 28033 TAGAAGTACAAAAATCAATATATAGTAAATCTGTTATGCAAGAGAAAATAAAACGGTATG 28092
||||||| || || || || |||| ||| || || ||| |||||||||||| ||||
Sbjct 47231 TAGAAGTCCAGAACTCCATCTATAATAAGGCTACGATCCAAACGAAAATAAAACGTTATG 47172
Query 28093 AAATGTATTTTTACAGTATGAAGTGGCAAGAAGAATCATGGCAGCCATCCAACaaaaaa- 28151
|| ||||||| || ||| | ||| || ||||||| ||||| ||| |||| || |
Sbjct 47171 AATCGTATTTTCGTAGCATGGAATGGAAAAAAGAATCGTGGCAACCA--AAACATAATAT 47114
Query 28152 -aTATTCCCCTCAATTTTAATCCTTACTGATAGAAAATATGAAGTCTCCAGTTCAAATTT 28210
|||| ||||| |||||||||||||||| |||||| | |||| ||||| || ||
Sbjct 47113 GGTATTTCCCTCTCTTTTAATCCTTACTGACCTCAAATATCCAATCTCTAGTTCTAACTT 47054
Query 28211 CCGCATATTTCAAGCG 28226
|| || |||||||||
Sbjct 47053 TCGTATTTTTCAAGCG 47038
>seq255890
Length=19928
Score = 785 bits (870), Expect = 0.0
Identities = 1277/1821 (70%), Gaps = 43/1821 (2%)
Strand=Plus/Plus
Query 26348 GGACTAACGA---TTGGAGCTGTTTTATTGGAAAGATATCTGGTTCAAAATGACCGGATT 26404
||| |||||| |||||| | || || |||| |||| || ||||||| | ||
Sbjct 17021 GGAGTAACGACAATTGGAGGGGCGTTGTTAGAAAAGCATCTTGTGAAAAATGATCATGTT 17080
Query 26405 ACAGCAGGTAAATTAGTATCAGATGGACTGTATCACGGACTTCGGATAGGTAGCATTGGT 26464
|||||| ||| | || |||||| | ||| | ||| | |||||||| | || ||
Sbjct 17081 GCAGCAGCGAAACTTTTAAGTGATGGAATATATTATGGAATGAGGATAGGTGGAGTTTGT 17140
Query 26465 TTTATTGTATATGTGTTCATTCGAGTTGTAAGGATGTTTTAAAGGGAGGGTATGA-ATGT 26523
|| |||| ||||| ||||||| | |||| ||||||||| |||||| || | |||
Sbjct 17141 TTCATTGGTTATGTATTCATTCAAATTGTGGAGATGTTTTA--GGGAGGAAATTACATGG 17198
Query 26524 GA----TGAAGGAATGGTTTCATAAAAGAGCTATAAAGAATCTTTTAATTGAGGTATTCa 26579
| | ||||| ||| |||||||| | | | ||||||| | || ||||||||
Sbjct 17199 GGATTTTAAAGGATTGGCTTCATAAACAAAGTTTGAAGAATCGACTTATAGAGGTATTTG 17258
Query 26580 aaaaaaGTGGTATTTACTATGAACACCAAACAAGAGGAGGTAAATTACCTGTTTTCCCGA 26639
||| ||| | || || || ||||||||||| || ||| |||| ||| |||||
Sbjct 17259 TAAAGGCAGGTTTATATGTAGACCATCAAACAAGAGGTGGAAAAGTACCCATTTACCCGA 17318
Query 26640 AAATCCAT--CATGTT---CTAGAAACAAAAGATTCTGTCCGATATACATTTACTTTACC 26694
| || ||| ||| || || |||| ||||| ||| |||| | |||||| | ||
Sbjct 17319 AGATACATGACATTTTTTCCTCGAAAGAAAAGGTTC-----GATACATATTTACCATTCC 17373
Query 26695 AAACGGGGTAGATCCGCAAACGATTGAGAAGAAATGGTTTTGCTTTCAGCAAATCTTAGG 26754
|||||| |||||||| ||| ||||| ||||| |||||||||||||| ||||| |||||
Sbjct 17374 AAACGGATTAGATCCGAAAAACATTGAAAAGAAGTGGTTTTGCTTTCAACAAATATTAGG 17433
Query 26755 GAGGGAACTGGCGATTGAAGGAGATATAAAACGCTTTGTATTGCACTCGTT-CAAAC--A 26811
| | | | || |||||||| ||||| ||| | |||||| | | ||| || | |
Sbjct 17434 GCGTAATGTAGCAATTGAAGGTGATATTAAAAGGTTTGTACTTAATGTGTTTCATTCGGA 17493
Query 26812 TAATAGCTTACAACCGTACTTGTATAACTATTCAGATTGGTTACCACATCTAAAAGGACA 26871
| | | ||||| | ||| || | ||| | ||| |||| || | | |||
Sbjct 17494 TGCTGGGCTACAAGCATACAATTACAGTTATAAGAAGTGGCAACCATTACTTATACAACA 17553
Query 26872 T-AGCATCCCTGTAGTGGTAGGAAAGGACCAATTTGGAAAGTGGATTGTATATGATATGA 26930
| | | |||| ||| | ||||| |||||||||||||| |||| ||||| ||||
Sbjct 17554 TCATCTTCCC-GTAATTGTAGGGCGTGACCAATTTGGAAATATGATTACGTATGACATGA 17612
Query 26931 CGGATTCGAATAGCCCACACTTATTAATAGCGGGAGAAACAGGAAGTGGTAAAAGTAGTA 26990
| ||| || | || || | |||| || ||||| ||||| || || ||||||||||
Sbjct 17613 TTGCTTCAAACACGCCGCATCTTCTAATTGCAGGAGAGACAGGGAGCGGAAAAAGTAGTA 17672
Query 26991 TGGTACGCGTTATTTTATCTACATTGATTCAACATTTGCCACCAGAATCATTACAGCTGT 27050
||||||||||| | | || ||| | |||||| || || | || || |||||| |||
Sbjct 17673 TGGTACGCGTTGTACTGTCCACACTCATTCAATATATGTCTCCTGATAAATTACATTTGT 17732
Query 27051 ATTTAGGTGATTTGAAGAACTCAGAATTTCACTTTTTAAGAAGAGTGCAACACGTTAAAA 27110
| | |||||||||||||| || |||||||| || || |||| ||| ||||||| |||
Sbjct 17733 ACCTGGGTGATTTGAAGAATTCCGAATTTCATTTCTTGCGAAGGGTGAAACACGTAAAAG 17792
Query 27111 AAGTTTGCATGGAAGAAGTAGAAATGGAGGTAATGTTAAACCAATTGTGGATGGAAATTA 27170
| ||||||||||||||| |||||||| || | ||| | | || |||||| ||||||
Sbjct 17793 AGGTTTGCATGGAAGAAATAGAAATGAAGATTATGCTGCAGAAAGTGTGGAAGGAAATAC 17852
Query 27171 TCAAAAGACGTAAGTGTATGGAGAAATATGAAGTAGACCACGTTAACGAATACAACAAAG 27230
| || | | || | ||||| | ||||||||||| || || ||||||||||||||
Sbjct 17853 GCGAACGTAGAAAATTGATGGAAGAGTATGAAGTAGATCATATTGACGAATACAACAAAT 17912
Query 27231 TGACTACAGAGGAAAAATTACCGTATATTTTAATTTGCATTGATGAGGTTGCGATGTTGG 27290
| | | | || | | ||| ||||| ||| || || || || || | ||||||
Sbjct 17913 TAAATCCTGATAATCAGAAACCATATATCTTACTTGCTATCGACGAAGTGGTCATGTTGC 17972
Query 27291 AAGATGAAAACGATAGTATGAAAATTATTAGAAAGATATCAGCTGTCGGGCGATCATTAG 27350
|||||||||| || ||||| || || ||| ||||| || ||||| | || | |
Sbjct 17973 AAGATGAAAAAGAATGTATGTCTATAGTTGAAAAAATATCGGCAGTCGGAAGGGCACTTG 18032
Query 27351 GCGTATTTTTAATGTTATCGATGCAGCGGCCGGATGCAACCGTTATCGATGGGAAATTAA 27410
| || ||||||||| || ||||| || || ||||||| || | ||||| || ||||
Sbjct 18033 GAGTTTTTTTAATGCTAAGTATGCAACGCCCTGATGCAAAAGTACTGGATGGTAAGTTAA 18092
Query 27411 AAGTGAATATGACAGTCAGAATGGGGTTCCAGTGTGATTCATCGTTAAATGCAGGA--AT 27468
| | |||||||| || |||||||| || | |||||| | | || ||| | ||
Sbjct 18093 AGCTCAATATGACGGTTAGAATGGGCTTTAAATGTGATAGTACAATTAA--CAGTAATAT 18150
Query 27469 TATAGGTACACCAGGTTCAGAACTGTTAGAGCAATCCGGGCAAATGATTTTCAAATTAAA 27528
||| ||||| || |||||||||| || |||||||| || |||||||| || || |||||
Sbjct 18151 TATGGGTACTCCTGGTTCAGAACGCTTGGAGCAATCTGGCCAAATGATATTAAAGTTAAA 18210
Query 27529 AGGACTAAAGAAAGTGCAAGCTCCAGAGTTAAAGTTAGAAAAAGCAAAGAAATTAGTGGC 27588
||| |||||||||| ||| |||| | ||| | ||| ||||| ||||| |||| |
Sbjct 18211 TGGATTAAAGAAAGTACAATCTCCTTATTTAGAATTAAGTAAAGCCAAGAAGATAGTTGA 18270
Query 27589 TCCT-------TTCAGAATGACAAAAGAAA-TAGAAGTAAGTA-CTGAAGTGAAAGAGGA 27639
||| ||| ||| || || | ||| | | | | || | ||| |||| |
Sbjct 18271 ACCTTATCGCGTTCCGAAAGAGAATATAAAGTTGCAAAACCTACCACAAG---AAGAAAA 18327
Query 27640 GCCTTTATTTGGGGTGTTAGATGATGAGGAATAGAGATATGGCTATTTTGAAGAATTTGA 27699
| ||||| |||||||||||| |||||||||||||| | || || | || |||||||
Sbjct 18328 TCAATTATTCGGGGTGTTAGATTATGAGGAATAGAGACAAAGCCATACTAAACAATTTGA 18387
Query 27700 CTAAATTTCGTTGTATGTCACGGGACGACATTGTGGAATTACA-CTTCAGCCATTTGAAA 27758
||| | |||||||| || || |||||| | || || || |||| | || ||
Sbjct 18388 AGCTTTTTAGATGTATGTCTCGTGATGACATTATTGATTTGCATTTTCAAGGA-TTAAAG 18446
Query 27759 AACCCAATAACATCATGCAATACGGTATTAAAAAGATTACGTAGAGATGGACATGTGGAA 27818
||| | | |||| || |||||||| | || ||||| | |||||||| ||||||||
Sbjct 18447 AACGCGGTTACATGCTGTAATACGGTGATGAAGCGATTAAGAAGAGATGGTCATGTGGAT 18506
Query 27819 GTGAATACTACATTCCAGCCATATGTGTATTTTCCACAACCAAGCGCAATTAGAAAAACA 27878
| |||| | |||||||| | || || || ||| | ||| || || | |||||
Sbjct 18507 GCCAATATCTCGCAACAGCCATACATTTACTTCCCTCAATCCAGCACACTTCGCAAAACT 18566
Query 27879 AGTCAAAAAATACCACATTTCTTAGGCATAGTAGATGCGTATAAACAATTGATCCAAAAT 27938
|| ||||| || || || || |||||||| |||||| |||||||| | ||| | ||
Sbjct 18567 AGCCAAAAGATTCCCCACTTTCTAGGCATATTAGATGTATATAAACAGCTTATCTATTAT 18626
Query 27939 GAGAAACCTAAGATTTTTAAAGTAGAACCGAAGTATGGAAAAGAATATATGGAACCTGAC 27998
|| |||||||| | |||||||| || || ||||| || ||||||| |||||||||||
Sbjct 18627 GAAAAACCTAAACTGTTTAAAGTGGAGCCAAAGTACGGTAAAGAATTCATGGAACCTGAT 18686
Query 27999 ATATTTACGATTTGGCGAAAAGCTCCTTTCTTTATAGAAGTACAAAAATCAATATATAGT 28058
|||||| |||||||| | | |||| ||||| || ||||| || | ||| | || ||
Sbjct 18687 GCATTTACAATTTGGCGTAGATCTCCATTCTTCATTGAAGTCCAGAGGTCAGTTTACAGC 18746
Query 28059 AAATCTGTTATGCAAGAGAAAATAAAACGGTATGAAATGTATTTTTACAGTATGAAGTGG 28118
||| ||||||||||| |||||||| |||||||| | || || ||||| | | |||
Sbjct 18747 AAAAAAGTTATGCAAGATAAAATAAATAGGTATGAATTATACTTCCACAGTCAGGAATGG 18806
Query 28119 CAAGAAGAATCATGGCAGCCA 28139
|| | ||||| |||||||||
Sbjct 18807 CATAACGAATCTTGGCAGCCA 18827
Score = 87.8 bits (96), Expect = 5e-13
Identities = 80/97 (82%), Gaps = 8/97 (8%)
Strand=Plus/Plus
Query 39637 AAAGAGCAGCTAGCAAAAGCTAACTGCTC-----AGGTAAT-GGAGAAAGATTACCATGT 39690
||| |||||||||||| |||||||||||| ||| ||| |||||||||| |||||||
Sbjct 1946 AAAAAGCAGCTAGCAATAGCTAACTGCTCATATAAGGGAATCGGAGAAAGATAACCATGT 2005
Query 39691 CATCTATAGTATTGACGGAATATTGAG-TTTTATTCA 39726
|| ||| |||| |||||||||| || |||||||||
Sbjct 2006 -GTCCATATTATTAACGGAATATTAAGTTTTTATTCA 2041
>seq41419
Length=13203
Score = 255 bits (282), Expect = 2e-63
Identities = 185/213 (87%), Gaps = 1/213 (0%)
Strand=Plus/Minus
Query 35610 TGGATAGTGGCTACCGTGGAGAGGTTGG-GGTGCTGGTTGATAACACTGAAAGACCAATA 35668
||||||||||||| ||||||| |||||| |||| |||| |||||||||||||||||||||
Sbjct 1804 TGGATAGTGGCTATCGTGGAGCGGTTGGAGGTGTTGGTAGATAACACTGAAAGACCAATA 1745
Query 35669 AGTTTAAATATGCAAGCTCATGTGATTGAAAAAGGAACACGTATTGCTCAAGGCGTCATA 35728
|||||||||||| |||||||||| || ||||||| ||||| || |||||||||||||||
Sbjct 1744 AGTTTAAATATGAAAGCTCATGTAATCAAAAAAGGTACACGCATCGCTCAAGGCGTCATA 1685
Query 35729 GCGCCAGTGGTAACAGCTCATTTCGTTGAAGTGGAAGAACTATCGGTTAGTGAACGTGGC 35788
||| |||| |||||||||||||| ||||| ||||| || |||| |||||||||||| ||
Sbjct 1684 GCGTCAGTAGTAACAGCTCATTTTGTTGAGGTGGACGAGCTATTGGTTAGTGAACGAGGT 1625
Query 35789 GTTGGGGGCTTTGGATCTACAGGTACTAAATAA 35821
||||| || |||| |||||| || || || |||
Sbjct 1624 GTTGGCGGATTTGAATCTACGGGAACGAAGTAA 1592
>seq158858
Length=235449
Score = 158 bits (174), Expect = 3e-34
Identities = 234/332 (70%), Gaps = 0/332 (0%)
Strand=Plus/Minus
Query 18602 AACATTTTATTAAAATCAAATGTTAAATATGAAAAAACAGACTATCTAATCAATCAATAT 18661
||| | |||||| |||| ||| | | | || |||||| || || || || |||
Sbjct 22245 AACCTATTATTAGAATCCAATATGGACTTCTCAACAACAGATTACCTTATTAAGATGTAT 22186
Query 18662 ACTCTAACTGAAAATTTCTTTGCGGGTGAAGAGTATACCTTTGTAATTAAAGGGAGTGTC 18721
| | | | || ||| || | || ||||||| || ||||| || ||||| | |||
Sbjct 22185 AGTTTGTCCGAGGATTGGATTACTGGACAAGAGTACACTTTTGTTATCAAAGGAACTGTT 22126
Query 18722 CCACAAGGACAGAAATTTGGAATTTGGCAGAATGGTGGGTCTAGCAATGTTGGATATGCA 18781
|| |||||| |||||||| || ||||| |||||||| || | || || || | ||
Sbjct 22125 CCTGCAGGACAAAAATTTGGTATATGGCAAAATGGTGGTTCAAATAAAGTAGGGGAAGCC 22066
Query 18782 ACAAGTGTTTACGCGAATGGAATAACTTATGTAACCTTCAAAGCAGTTGCAGCTACAAGT 18841
|||| || | ||||||| ||||||||||||| ||||||||| | || | |||| |
Sbjct 22065 ACAACAACATATGTGAATGGAGTAACTTATGTAACTTTCAAAGCAATAGCTACAACAACT 22006
Query 18842 GGGAATGAACGAAAATTAAGCTTATATAACTATCCGAGTAGCACTACGAAATCTATTGTG 18901
|| |||||| ||||| |||| ||||||||||| || | || || ||| | |||
Sbjct 22005 GGTAATGAAAGAAAACTAAGTTTATATAACTACCCTCAAAATACCACACTATCCACTGTA 21946
Query 18902 GAATGGGTGGCCTTGTATAAAGGGAATAAGCC 18933
|| ||||| ||| | || ||||| ||||||||
Sbjct 21945 GATTGGGTTGCCCTATACAAAGGAAATAAGCC 21914
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 139507885769960
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