Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_031095.1
Length=168758
Score E
Sequences producing significant alignments: (Bits) Value
seq26767 185 9e-42
>seq26767
Length=1149
Score = 185 bits (204), Expect = 9e-42
Identities = 314/455 (69%), Gaps = 0/455 (0%)
Strand=Plus/Minus
Query 136347 ACGTTATTCGTTTCTATGATGCAGTTTCTACTAAAAAGATTTCATTGCCAACACCAATTA 136406
||||| ||||| ||| |||| |||| ||| || ||||| || || ||||||||||
Sbjct 487 ACGTTCAGCGTTTTTATAATGCCATTTCAACTTTCAAAATTTCTTTACCGACACCAATTA 428
Query 136407 TGTCTGGTGTTCGTACTCCAACCCGCCAGTTCAGTTCATGCGTAGTTATTGAAGGTGGTG 136466
||||||| ||| | ||||| || || || || || ||||| || | |||||| ||| ||
Sbjct 427 TGTCTGGAGTTAGAACTCCTACTCGACAATTTAGCTCATGTGTTTTAATTGAATGTGATG 368
Query 136467 ATAGTCTTAATTCAATTAACGAAGCCGCTGCATCAATTACGAAATACATTAGTAAGCGTG 136526
||| ||| |||| ||||||| | || || ||| ||||| || | | || |
Sbjct 367 ATAATCTAGATTCTATTAACGCTACTACTAGTTCTATTGTAAAATATGTTTCTCAACGAG 308
Query 136527 CTGGTATTGGTATTAATGCGGGGATGATTCGTGCAGAAGGATCAAAAATTGGATTCGGTG 136586
| || |||||||||||||| || | |||||||||| ||| ||| || || |
Sbjct 307 CAGGAATTGGTATTAATGCTGGAAAAATTCGTGCAGTAGGTAGTCCTATTAGAAATGGCG 248
Query 136587 AAGTCAAGCATACTGGTGTTATTCCTTTCTGGAAACACTTCCAAACCGCAGTTAAGTCAT 136646
||| ||||||||| ||||||||| | ||||| || |||| || || || || |
Sbjct 247 AAGCATTTCATACTGGTTGTATTCCTTTTTATAAACATTTTCAAAGTGCTGTAAAATCCT 188
Query 136647 GCTCCCAAGGCGGAGTCCGTGGTGGTGCAGCTACACTGTATTATCCGATGTGGCACTTGG 136706
| || ||||| ||||| | ||||| || || || | | |||||| || ||||| || |
Sbjct 187 GTTCTCAAGGAGGAGTTAGAGGTGGAGCGGCAACTATATTTTATCCAATATGGCATTTTG 128
Query 136707 AAGTTGAAAACCTCCTCGTACTTAAGAACAACAAAGGTGTAGATGAAAACCGTATTCGCC 136766
|| |||||| | | || | || || || | || | || ||||| | | || |
Sbjct 127 AAATTGAAAGTTTATTAGTTTTAAAAAATAATAGGGGCATTGAAGAAAATAGAGTACGTC 68
Query 136767 ATTTAGATTATGGTGTTCAGATTAATAACCTGATG 136801
| | ||||||| || || |||||||| |||||
Sbjct 67 ACGTTGATTATGCAGTACAAATTAATAAATTGATG 33
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 538094153051840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |