Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_031098.1 Length=40749 Score E Sequences producing significant alignments: (Bits) Value seq6041 84.2 6e-12 >seq6041 Length=422222 Score = 84.2 bits (92), Expect = 6e-12 Identities = 132/185 (71%), Gaps = 3/185 (2%) Strand=Plus/Minus Query 33313 TATTCGCTCTATCTCAGCTTAGCCGCAACTTAGAGAACAGACCTAACAAACGTCCAGTTA 33372 |||| || ||||||||||||| ||| | |||| ||| | || || ||||| || | | Sbjct 190438 TATT-GCCCTATCTCAGCTTAACCGTAGTCTAGAAAACCGTCCGAATAAACGCCCTATCA 190380 Query 33373 ATGCTGATCTCCGCGAATCTGGC-CAATTGGAGCAGGATGCGGACGTGATTCTATTCATT 33431 | ||||| || |||||||| | |||| |||||||||| || ||||| | ||||| Sbjct 190379 TGTCGGATCTGCGAGAATCTGGTGCGATTG-AGCAGGATGCCGATTTGATTATGTTCATC 190321 Query 33432 TACCGCGACGAAGTTTACGACAAGAACTCAAAAGATGCAGGAACTGCTGAAATCATCATC 33491 || || || || ||||| | ||||||| | | ||| |||||||||||||| Sbjct 190320 TATCGTGATGAGGTTTATAATGAGAACTCCGACCACAAAGGGGTGGCTGAAATCATCATT 190261 Query 33492 GGAAA 33496 || || Sbjct 190260 GGTAA 190256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129861793473896