Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_031100.1 Length=164443 Score E Sequences producing significant alignments: (Bits) Value seq149378 105 7e-18 >seq149378 Length=35185 Score = 105 bits (116), Expect = 7e-18 Identities = 148/203 (73%), Gaps = 6/203 (3%) Strand=Plus/Plus Query 41311 GAATATATGGCAAGTTTAGCTAACCAAACTGTCCAATCGGCAAATACCGTGT--ACTTCA 41368 || |||||||||| | || || ||||| || || | | || |||| | | ||| Sbjct 32785 GACTATATGGCAACACTTGCAAAGCAAACGGTTGAAACCGGTAA--CCGTATTTATATCA 32842 Query 41369 TGATTAAAAACGTTCCGATTGCTCGCGCTCAATCTATCAGCTC-TGAACGTTCATTCGGT 41427 ||||||| |||| |||| ||| |||||||| || | || ||| || ||||||||| Sbjct 32843 TGATTAAGAACGAAGTTATTGGTCGTGCTCAATC-ATTAACTGGTGACCGCTCATTCGGT 32901 Query 41428 ACTCAAGGTGTTTACCAAATTGGTTCCATCATGCCACAGGAACACGTATACTTACGTTAT 41487 || |||||||| || || ||||||| ||||||||||| |||||||||| |||| ||| Sbjct 32902 ACCCAAGGTGTGTATGAACTTGGTTCAATCATGCCACATGAACACGTATTCTTAAAGTAT 32961 Query 41488 GAAGGTTCTGTAACGGTAGAACG 41510 ||| | ||| | || ||||| Sbjct 32962 ACGGGTACGGTATCAGTTGAACG 32984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524332276604640