Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_031946.1 Length=40443 Score E Sequences producing significant alignments: (Bits) Value seq104206 96.9 9e-16 >seq104206 Length=286 Score = 96.9 bits (106), Expect = 9e-16 Identities = 128/178 (72%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 26705 TTTGATCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGAACCTTTTC 26764 ||||||||||||||||||| || ||||| ||||||| ||| || | ||||||||||| Sbjct 58 TTTGATCCTGCCATTTTCTAGTTTGCAATGATCCTTCAATATATACTTGAGAACCTTTTC 117 Query 26765 GCAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCACACGGTGCCACTCCG 26824 | ||||| |||| |||||||| || | ||| || | || | | ||||| || | Sbjct 118 GAAGATATTCGCCTGCAATTTCAGCTAATTTACCAAATAAAACTATTCTATGCCATTCAG 177 Query 26825 TCTGCTCCTTTTGCTCTCCAGTTTGCTTATCACGCCATTGTTCTGACGTAGCAACTGT 26882 | | || || | |||||||| | ||||| ||| | |||||| || || | ||| Sbjct 178 TTTTTTCTTTATTTTCTCCAGTATTTTTATCTTTCCAATTTTCTGAAGTTGCTAATGT 235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128885700801080