Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq6 170 4e-37 seq5 105 1e-17 seq10 104 5e-17 seq3 104 5e-17 seq1 104 5e-17 seq8 102 2e-16 seq4 102 2e-16 seq7 98.7 2e-15 seq2 98.7 2e-15 >seq6 Length=112752717 Score = 170 bits (188), Expect = 4e-37 Identities = 585/890 (66%), Gaps = 39/890 (4%) Strand=Plus/Minus Query 229753 TCTGC--GTTCCCAATCCAATATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCAA 229810 ||||| ||||||||||||||| || || || ||||| ||||||||||| |||| |||| Sbjct 97172792 TCTGCATGTTCCCAATCCAATACCCTGAGATATGGGAAATGTACAAGAAAGCGGAGGCAT 97172733 Query 229811 CTTTCTGGACCACTGAGGAAGTTCCTCTGAACGCAGACGTCGTCGACTGGCGTGAGAAAC 229870 | |||||||| | ||||||||| || || ||| || | ||||| || | Sbjct 97172732 CGTTCTGGACAGCGGAGGAAGTTGACCTTTCCGGCGACATCCGCCACTGG---GAATCTC 97172676 Query 229871 TCAATGACGACGAACGTCATTTCATCAAACACATCCTAGGTTTTTTCGCAGGCTCCGATG 229930 ||| |||| ||| || || || |||| ||| |||| | || ||||| | ||||| | Sbjct 97172675 TCACCGACGGCGAGCGCCACTTTATCACTCACGTCCTTGCCTTCTTCGCCGCATCCGACG 97172616 Query 229931 GTATTGTGATGGAAAATCT-GCAGACCAACTTTAGTGT-GGAAGTAACGGTTCCAGAGGC 229988 | || || |||| ||||| || | || || || ||| || ||| | ||||| Sbjct 97172615 GCATCGTCCTGGAGAATCTTGCCGG--AAGGTTCATGAAGGAGGTTCAGGTCGCCGAGGC 97172558 Query 229989 ACGGCAATTTTATGCTTACCAAA---CATTCAACGAATCTATCCATTCTGAACAATATGC 230045 ||| || || | | ||| | || || | ||| ||||| || || || Sbjct 97172557 ACGCGCCTTCTACGGCTTCCAGATCGCAATCGA-GAAC--ATCCACTCAGAGATGTACAG 97172501 Query 230046 TCTGCTTATCGACGCGCTTATTTCC--GACG-AGCA-AGAACGGAACGAGCTTTTTGATG 230101 || ||| |||| | ||| || ||| | || |||| ||| || || | | Sbjct 97172500 CCTCCTTCTCGAAAC--TTACATCAAAGACTCATCAGAGAA--GAATCGTCTCTTCCACG 97172445 Query 230102 CCATTGAAAACATCCCGGCGGTTCATAACAAGGCAAAGTGGGCTCAGAAATGGCTAGAAC 230161 | ||||| | | | || || | || || || ||||||| | |||| | || Sbjct 97172444 CAATTGAGACCGTTCCTTGTGTAAAGAAGAAAGCTGAGTGGGCCCTACGATGGATCGA-- 97172387 Query 230162 CTGGTA---AATCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGT 230218 ||| ||||||| || || || ||||||| | | || || ||||| || | | Sbjct 97172386 -TGGCTCAGAATCGTTCGCGGAACGCATCGTCGCGTTCGCCTGCGTCGAAGGGATCTTCT 97172328 Query 230219 TTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTG---ATGCCTGGCC 230275 | |||||||| |||||| | || ||||||||| || || ||| | ||||| || Sbjct 97172327 TCTCCGGGAGCTTCTGCTCGATATTTTGGCTG---AAAAAGCGTGGGTTAATGCCAGGTT 97172271 Query 230276 TCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGC 230335 | | || |||||||| ||| || || || || ||||| | |||| || || Sbjct 97172270 TAACCTTCTCGAACGAGTTGATCTCGCGAGATGAAGGCCTCCACTGCGATTTCG-CGTGC 97172212 Query 230336 TTA-TGTATTCAAAGCTCCAGAACAAGCTACCATTCGAGACGGTCAAACAAATCATTACA 230394 || |||| || || ||| ||||| || ||| || || ||| | | Sbjct 97172211 TTGCTGTACTCTCTTCTGAGGAAGAAGCTCCCTGAGGAGCGTGTGAAGGGGATCGTGAAG 97172152 Query 230395 GAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATT-GG 230453 || || || || | || | |||||| | || ||||| |||| || ||| || | || Sbjct 97172151 GACGCCGTGGATATAGAGAGGGAGTTTGTGTGCGACGCGCTTCCTTG-CGCGTTGGTAGG 97172093 Query 230454 CATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGC 230513 ||||||| || || ||| | ||||| || || ||||| || || || | | || || Sbjct 97172092 AATGAACGGAGACCTGATGAGTCAGTATATTGAGTTCGTTGCAGATCGGTTGCTGGTGGC 97172033 Query 230514 ACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTC 230573 ||||| | | |||| |||||||| | ||||||| |||| | |||||||| ||||| Sbjct 97172032 GCTTGGGTGCAAGAAGGTGTACAATGTTCAGAACCCTTTTGATTGGATGGAGCTTATTTC 97171973 Query 230574 GCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGA 230623 |||||| ||||||||||||||||| ||||||||||| | || || |||| Sbjct 97171972 GCTTCAGGGGAAGACCAACTTCTTTGAAAAGCGTGTTGGGGAGTACCAGA 97171923 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 11408463 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 11408404 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 11408403 CCCACGGTGGGC 11408392 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 100503323 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 100503264 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 100503263 CCCACGGTGGGC 100503252 >seq5 Length=110037037 Score = 105 bits (116), Expect = 1e-17 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||||||||||||||||||||||||| || || |||| || ||||||||||||||||| Sbjct 5246755 TGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 5246814 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 5246815 CCCCACGGTGGGC 5246827 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 13129901 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 13129960 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 13129961 CCCACGGTGGGC 13129972 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 95156889 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 95156948 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 95156949 CCCACGGTGGGC 95156960 Score = 86.0 bits (94), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 || |||||||||||||||||||||||| || || |||| || ||||||||||||| ||| Sbjct 90951684 GCTCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTTGAGT 90951743 Query 165770 CCCACGATGG 165779 |||||| ||| Sbjct 90951744 CCCACGGTGG 90951753 >seq10 Length=109463236 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 19309727 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 19309786 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 19309787 CCCACGGTGGGC 19309798 >seq3 Length=135057546 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 1658720 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1658779 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1658780 CCCACGGTGGGC 1658791 >seq1 Length=107035537 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || ||||||| |||||||||||||||||| Sbjct 28740934 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAATCTTGTGGTCGTGGGTTCGAGC 28740875 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 28740874 CCCACGGTGGGC 28740863 >seq8 Length=49462234 Score = 102 bits (112), Expect = 2e-16 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 165701 AAAACGCTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTG 165760 |||| | ||||||||||||||||| |||||||||| || || |||| || ||||||||| Sbjct 12846567 AAAATGTCTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTG 12846626 Query 165761 GGTTCGAGCCCCACGATGGGC 165781 ||||||||||||||| ||||| Sbjct 12846627 GGTTCGAGCCCCACGGTGGGC 12846647 >seq4 Length=123556382 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 |||||||||||||||||| |||||||||| || || |||| || |||||||||||||||| Sbjct 105539633 TTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 105539574 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 105539573 GCCCCACGGTGGGC 105539560 >seq7 Length=79126724 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 13229377 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 13229436 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 13229437 CCCACGGTGGGC 13229448 >seq2 Length=93869048 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 37380321 GCCCGTCTAGCTCAGTCGGTAGAGCGTAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 37380262 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 37380261 CCCACGGTGGGC 37380250 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 87017683 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 87017624 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 87017623 CCCACGGTGGGC 87017612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057803575071410