Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25]
1,507 sequences; 1,084,261,490 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq6 140 3e-28
>seq6
Length=112752717
Score = 140 bits (154), Expect = 3e-28
Identities = 474/727 (65%), Gaps = 25/727 (3%)
Strand=Plus/Plus
Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735
||||| || | ||| || ||||| || ||||| || || |||| || || ||| ||||
Sbjct 97171925 TGGTACTCCCCAACACGCTTTTCAAAGAAGTTGGTCTTCCCCTGAAGCGAAATAAGCTCC 97171984
Query 16736 ATGAAATCAAAAGGATTAGTAGCTGAAAATATT-----TTAGAGTACCCCAGTTCGGCGA 16790
|| |||||||||| || ||||| || | || | |||| || | | |
Sbjct 97171985 ATCCAATCAAAAGGGTT-----CTGAACATTGTACACCTTCTTGCACCCAAGCGCCACCA 97172039
Query 16791 TTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAA 16850
|| | ||| || || || || ||||| || | ||| | || | ||||||||||| |
Sbjct 97172040 GCAACCGATCTGCAACGAACTCAATATACTGACTCATCAGGTCTCCGTTCATTCCTACCA 97172099
Query 16851 GACGTACC-GGAAGAGCTTCCGTCAAAAA-TCGTTGCTCTATAACAACCGCTTCCTTAAT 16908
||| | ||||| || || || ||| || | ||||||| | || || ||||| |
Sbjct 97172100 -ACGCGCAAGGAAGCGCGTCGCACACAAACTCCCT-CTCTATATCCACGGCGTCCTTCAC 97172157
Query 16909 AATACTAGCAACTCGTTCCTCGGACGGTGTATGTT--TAAGATGTTTAAACATCAGACAT 16966
|| | || || ||||| | || | | || | ||| | ||| || ||
Sbjct 97172158 GATCCCCTTCACACGCTCCTCAG--GGAGCTTCTTCCTCAGAAGAGAGTACAGCAAGCAC 97172215
Query 16967 GCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCG 17026
||||||||||| || | || || |||| ||| | ||||| || || || || ||
Sbjct 97172216 GCGAAATCGCAGTGGAGGCCTTCATCTCGCGAGATCAACTCGTTCGAGAAGGTTAAACCT 97172275
Query 17027 GGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATA 17086
||||| || || || || | ||||||||||| | ||| ||| || ||||| ||
Sbjct 97172276 GGCATTAACCCACGCTTTTTCAGCCAAAATATCGAGCAGAAGCTCCCGGAGAAGAAGATC 97172335
Query 17087 CCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATC 17146
|| |||||| | || ||||||| | ||||| ||| ||| ||| | | |||
Sbjct 97172336 CCTTCGACGCAGGCGAACGCGACGATGCGTTCCGCGAACGAT---TCTGAGCCATCGATC 97172392
Query 17147 CATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAAT 17206
||| | ||||||| ||||| | ||||| ||| | || || || || | ||
Sbjct 97172393 CATCGTAGGGCCCACTCAGCTTTCTTCTTTACACAAGGAACGGTCTCAATTGCGTGGAAG 97172452
Query 17207 AATTTCTCTTTTTC-CTGTAG-GTCGATTATATACGTATCGATGAGTAGGCTGTACATTT 17264
| | || ||| ||| | ||| | || || || |||| || ||||||||||| |
Sbjct 97172453 AGA--CGATTCTTCTCTGATGAGTCTTTGATGTAAGTTTCGAGAAGGAGGCTGTACATCT 97172510
Query 17265 CGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTT 17324
| ||||| |||||||| || || ||||| || ||||| ||| || || || || | |
Sbjct 97172511 CTGAGTGGATGTTCTCGATTGCGATCTGGAAGCCGTAGAAGGCGCGTGCCTCGGCGACCT 97172570
Query 17325 GAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGA 17384
|||| ||| ||| | | | || ||||| || |||||||||||| |||||||
Sbjct 97172571 GAACCTCCTTCATGAACCTTCCGGCAAGATTCTCCAGGACGATGCCGTCGGATGCGGCGA 97172630
Query 17385 AAAACGC 17391
| || ||
Sbjct 97172631 AGAAGGC 97172637
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517535850734760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |