Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25]
1,507 sequences; 1,084,261,490 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq3 136 6e-27
seq6 96.9 5e-15
seq9 86.0 9e-12
seq5 84.2 3e-11
>seq3
Length=135057546
Score = 136 bits (150), Expect = 6e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| ||| | ||||||||||| || || || ||||| | ||| | ||| |
Sbjct 22723053 ATGCAAATCTTTGTCAAGACACTAACCGGAAAGACAATAACCCTGGAGGTCGAATCTTCG 22722994
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| |||||| ||| | ||| ||||| ||||| ||||| ||||| |||||||||||
Sbjct 22722993 GACACAATTGACAATGTCAAAGCAAAAATCCAAGACAAAGAGGGTATCCCACCTGATCAG 22722934
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| || ||||| ||||| || || || || |||||| | | || | | ||||| ||
Sbjct 22722933 CAGAGACTTATCTTTGCTGGTAAGCAGTTGGAGGATGGAAGGACCCTTGCTGATTACAAC 22722874
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| || || || || |||||| | ||||| || | |||||||| ||
Sbjct 22722873 ATTCAGAAGGAGTCCACCTTGCATCTTGTTTTGCGACTCCGAGGTGGAAT 22722824
Score = 136 bits (150), Expect = 6e-27
Identities = 173/238 (73%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | || || | || ||||| || || || | ||| | |||
Sbjct 22723737 ATGCAAATCTTCGTGAAAACCTTGACGGGCAAGACCATCACCCTTGAGGTGGAAAGTTCC 22723678
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||||||| |||| | || |||||||| ||||||||||| || || ||||| ||
Sbjct 22723677 GATACAATTGATAATGTCAAGGCCAAAATTCAGGATAAAGAAGGAATCCCTCCTGACCAG 22723618
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||||||||||||||| ||||||||| | || ||| || |||| | | ||||| ||
Sbjct 22723617 CAAAGGCTTATTTTTGCCGGAAAACAACTTGAAGATGGTAGAACCCTTGCCGATTACAAC 22723558
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
||||| || ||||| || | || ||||| | |||||| ||||||| || ||| ||
Sbjct 22723557 ATTCAGAAGGAATCCACACTCCACTTGGTGCTTCGTTTAAGAGGTGGCATGCAAATTT 22723500
Score = 134 bits (148), Expect = 2e-26
Identities = 173/239 (72%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
||||||||| ||| | ||||| | || || || || || ||| | ||| |||||
Sbjct 22722826 AATGCAAATCTTTGTCAAGACCTTGACCGGAAAGACAATCACTTTGGAGGTTGAAAGTTC 22722767
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|||||||||| |||| | || ||| ||||| || ||||| ||||| || || |||||
Sbjct 22722766 TGATACAATTGATAATGTGAAGGCGAAGATTCAGGACAAAGAGGGTATCCCTCCGGATCA 22722707
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|| ||||| || |||||||| || || | || ||| | || || | | ||||| ||
Sbjct 22722706 GCAGAGGCTCATCTTTGCAGGGAAGCAGCTTGAAGATGGCCGTACTCTTGCTGATTACAA 22722647
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
|| ||||| ||||| ||||||||||||||| | | | || |||||||| ||| ||
Sbjct 22722646 CATACAAAAGGAATCTACTTTGCATTTGGTTCTGAGGCTCCGTGGTGGTATGCAAATTT 22722588
>seq6
Length=112752717
Score = 96.9 bits (106), Expect = 5e-15
Identities = 153/218 (70%), Gaps = 1/218 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| | || || ||||| || || || |||||| | ||| ||||| |
Sbjct 25200207 ATGCAGATCTTTGTGAAAACCCTAACGGGAAAGACCATAACTCTCGAGGTTGAATCTTCG 25200148
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| ||||| || | || || ||||||||||||||||| || || |||||||||
Sbjct 25200147 GACACAATAGACAACGTGAAGGCCAAGATTCAAGATAAAGAAGGAATCCCTCCTGATCAA 25200088
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | || || || || || || ||||||||||| | | || | | ||||| ||
Sbjct 25200087 CAGCGACTCATCTTCGCTGGGAAGCAATTAGAGGACGGGAGGACGCTTGCTGATTACAAC 25200028
Query 124719 ATTCAAAAAGAATCAACTTTGCAT-TTGGTTTTACGTT 124755
|| || || || || || |||||| ||| | ||| |||
Sbjct 25200027 ATACAGAAGGAGTCGACGTTGCATCTTGTTCTTAGGTT 25199990
>seq9
Length=120672674
Score = 86.0 bits (94), Expect = 9e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
||||| || ||| | ||||| || || || ||||| || || | ||| | || |||
Sbjct 111905258 ATGCAGATCTTTGTGAAGACCCTTACCGGAAAAACCATCACCCTTGAGGTAGAGAGCTCC 111905199
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| || ||| ||| | || || || || ||||| ||||| || || || || ||
Sbjct 111905198 -GACACCATTGACAATGTTAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCGGACCA 111905140
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
||||||||||| ||||| || || || | |||||| | || || || | ||||| ||
Sbjct 111905139 GCAAAGGCTTATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGATTACAA 111905080
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||| || || || ||||| | || | || || ||| | || ||||| ||
Sbjct 111905079 TATCCAGAAGGAGTCAACCCTCCACCTTGTGTTGCGTCTCCGTGGTGGCAT 111905029
Score = 86.0 bits (94), Expect = 9e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
||||| || ||| ||||||| || || || ||||| || || | ||| | || |||
Sbjct 111905486 ATGCAGATCTTTGTAAAGACCCTTACCGGAAAAACCATCACCCTTGAGGTAGAGAGCTCC 111905427
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| || ||| || | || ||| || || ||||| ||||| || || || || ||
Sbjct 111905426 -GACACCATTGACAACGTCAAGGCGAAGATCCAGGATAAGGAAGGCATCCCTCCGGACCA 111905368
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
||||||||||| || || || || || | |||||| | || || || | ||||| ||
Sbjct 111905367 GCAAAGGCTTATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGATTACAA 111905308
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||| || || || || || | || ||||| || || | || ||||| ||
Sbjct 111905307 TATCCAGAAGGAGTCCACACTCCACTTGGTCTTGCGGCTTCGTGGTGGCAT 111905257
Score = 86.0 bits (94), Expect = 9e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
||||| || ||| | ||||| || || || ||||| || || | ||| | || |||
Sbjct 111941589 ATGCAGATCTTTGTGAAGACCCTTACCGGAAAAACCATCACCCTTGAGGTAGAGAGCTCC 111941530
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| || ||| ||| | || || || || ||||| ||||| || || || || ||
Sbjct 111941529 -GACACCATTGACAATGTTAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCGGACCA 111941471
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
||||||||||| ||||| || || || | |||||| | || || || | ||||| ||
Sbjct 111941470 GCAAAGGCTTATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGATTACAA 111941411
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||| || || || ||||| | || | || || ||| | || ||||| ||
Sbjct 111941410 TATCCAGAAGGAGTCAACCCTCCACCTTGTGTTGCGTCTCCGTGGTGGCAT 111941360
Score = 86.0 bits (94), Expect = 9e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
||||| || ||| ||||||| || || || ||||| || || | ||| | || |||
Sbjct 111941817 ATGCAGATCTTTGTAAAGACCCTTACCGGAAAAACCATCACCCTTGAGGTAGAGAGCTCC 111941758
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| || ||| || | || ||| || || ||||| ||||| || || || || ||
Sbjct 111941757 -GACACCATTGACAACGTCAAGGCGAAGATCCAGGATAAGGAAGGCATCCCTCCGGACCA 111941699
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
||||||||||| || || || || || | |||||| | || || || | ||||| ||
Sbjct 111941698 GCAAAGGCTTATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGATTACAA 111941639
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||| || || || || || | || ||||| || || | || ||||| ||
Sbjct 111941638 TATCCAGAAGGAGTCCACACTCCACTTGGTCTTGCGGCTTCGTGGTGGCAT 111941588
>seq5
Length=110037037
Score = 84.2 bits (92), Expect = 3e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682
|||||||||||||| ||||| || ||||| ||||| ||| | || || || || |||||
Sbjct 20101499 AAAATTCAAGATAAGGAAGGGATCCCACCGGATCAGCAACGTCTGATCTTCGCCGGAAAG 20101440
Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742
||| | ||||| | || || || | || || || || || || ||||| || | ||
Sbjct 20101439 CAACTCGAGGACGGCCGCACCTTGGCCGACTACAACATCCAGAAGGAATCCACCCTCCAC 20101380
Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768
| ||| | ||| | || ||||||||
Sbjct 20101379 CTCGTTCTCCGTCTCCGTGGTGGTAT 20101354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755441769097600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |