Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq4 123 2e-23 seq3 109 4e-19 seq5 102 5e-17 seq6 98.7 6e-16 seq9 96.9 2e-15 >seq4 Length=123556382 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || ||| ||||| ||||||||||||| Sbjct 120131199 CCACCGCGGAGGCGGAGGACGAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCG 120131258 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| |||| ||||||||| ||||| ||||| ||||||||||| || Sbjct 120131259 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGG 120131318 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | | || | |||| || || || Sbjct 120131319 ATGCCTTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCGATGGTGTCGGAAGACTCCACC 120131378 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||| |||||||| || || || || |||||||| |||||||||||| Sbjct 120131379 TCCAGGGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 120131426 >seq3 Length=135057546 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || ||| ||||| ||||||||||||| Sbjct 124352757 CCACCGCGGAGGCGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCG 124352698 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | ||||||||| ||||| ||||| ||||||||||| || Sbjct 124352697 AGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 124352638 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | | || | |||| || || || Sbjct 124352637 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 124352578 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| || || || || |||||||| |||||||||||| Sbjct 124352577 TCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 124352530 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || |||||||| |||| || |||||| ||| || ||||||||||| || | Sbjct 22722599 CCACCACGGAGCCTCAGAACCAAATGCAAAGTAGATTCCTTTTGTATGTTGTAATCAGCA 22722658 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACGG 34280 || |||| | || || | |||||| ||||| || ||||||| |||||| || || || Sbjct 22722659 AGAGTACGGCCATCTTCAAGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGATCCGGAGGG 22722718 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 || |||| ||||| ||||| ||| | || | || | ||| | ||| | Sbjct 22722719 ATACCCTCT--TTGTCCTGAATCTTCGCCTTCACATTATCAATTGTATCAGAACTTTCAA 22722776 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| ||||| || || ||||| | || || |||||||| ||||| Sbjct 22722777 CCTCCAAAGTGATTGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 22722825 >seq5 Length=110037037 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 |||||||| || | || || || || | || ||||||||| |||||||| |||| Sbjct 23423269 CCGCCGCGGAGGCGTAGGACGAGATGGAGCGTGGATTCTTTCTGGATGTTGTAATCGGCG 23423210 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281 || ||| |||| || | |||||| || ||||| ||||| |||||||||| || |||| Sbjct 23423209 AGTGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 23423150 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | || ||||| ||||| ||| | | | | || | |||| ||||| || Sbjct 23423149 -ATTCCTTCTTTGTCTTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAAGATTCCAC 23423091 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| || || || || |||||||| || |||||||| Sbjct 23423090 CTCAAGGGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAAATCTGCAT 23423043 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGAC-AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 || ||||| ||||||||||| | | || || ||| |||| || | |||||| || ||||| Sbjct 20101165 TCCTTCTGGATGTTGTAGTCTGCCAAGGTG-CGGCCGTCCTCAAGCTGCTTCCCGGCGAA 20101223 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || | || ||||||||| || | | |||||| || || || ||| | | Sbjct 20101224 GATCAACCTCTGCTGGTCCGGTGGAATACCCTCCTTATCCTGGATTTTAGCCTTGACGTT 20101283 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | |||| ||| || || | |||||||| ||||||||||| || || || Sbjct 20101284 GTCAATGGTGTCGGAGCTTTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTAAC 20101343 Query 34378 AAAGATCTGCAT 34389 ||||||||||| Sbjct 20101344 GAAGATCTGCAT 20101355 >seq6 Length=112752717 Score = 98.7 bits (108), Expect = 6e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || || ||||| | || || ||||| || || ||||||| Sbjct 25200437 CCGCCACGGAGGCGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATATTATAGTCGGCA 25200496 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281 || || |||| || | |||||| || ||||| ||||| |||||||||| || |||| Sbjct 25200497 AGGGTGCGACCGTCTTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGG 25200556 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||||| ||||| ||| | || | | || | ||||| || || || Sbjct 25200557 -ATGCCTTCCTTGTCTTGGATCTTAGCCTTCACATTGTCGATGGTATCGGAGGACTCCAC 25200615 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || || || || || || || |||||||| ||||||||||| Sbjct 25200616 CTCCAAGGTAATCGTCTTCCCTGTTAGGGTTTTCACGAAGATCTGCAT 25200663 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 |||||||| || | || || ||||| | || || || || |||||||| |||| Sbjct 25200209 CCGCCGCGAAGACGGAGAACAAGGTGGAGCGTGGACTCCTTTTGAATGTTGTAATCGGCG 25200268 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || || | ||| || || ||||| ||||| |||||||| ||| || Sbjct 25200269 AGGGTGCGACCATCCTCTAGCTGTTTCCCGGCGAAGATGAGTCGCTGCTGATCGGGAGGA 25200328 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || || ||||| ||||| ||| | | | | || | |||| ||||| || Sbjct 25200329 ATGCCTTCTTTGTCTTGAATCTTGGCCTTCACGTTGTCGATTGTGTCGGAGGATTCAACC 25200388 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||| || || ||||| || ||||| || ||||||||||| Sbjct 25200389 TCCAGAGTGATCGTCTTTCCGGTTAGGGTTTTGACGAAGATCTGCAT 25200435 >seq9 Length=120672674 Score = 96.9 bits (106), Expect = 2e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| ||||||||||| | || ||| |||| || | ||||||||| ||||| Sbjct 111905751 TTCCTTCTGGATGTTGTAGTCAGCGAGTGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 111905810 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 ||||| ||||||||||| ||| | || |||||||| |||||| ||| | | Sbjct 111905811 GATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCTTGAATCTTTGCCTTAACGTT 111905870 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | || | ||||| || | ||||| || || |||||||| || || || Sbjct 111905871 GTCGATGGTGTCTGAGCTCTCGACTTCGAGAGTGATAGTCTTCCCGGTGAGGGTCTTAAC 111905930 Query 34378 AAAGATCTGCATC 34390 ||||| |||||| Sbjct 111905931 GAAGATTTGCATC 111905943 Score = 96.9 bits (106), Expect = 2e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| ||||||||||| | || ||| |||| || | ||||||||| ||||| Sbjct 111942082 TTCCTTCTGGATGTTGTAGTCAGCGAGTGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 111942141 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 ||||| ||||||||||| ||| | || |||||||| |||||| ||| | | Sbjct 111942142 GATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCTTGAATCTTTGCCTTAACGTT 111942201 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | || | ||||| || | ||||| || || |||||||| || || || Sbjct 111942202 GTCGATGGTGTCTGAGCTCTCGACTTCGAGAGTGATAGTCTTCCCGGTGAGGGTCTTAAC 111942261 Query 34378 AAAGATCTGCATC 34390 ||||| |||||| Sbjct 111942262 GAAGATTTGCATC 111942274 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 34160 AATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG 34219 ||||| || || || | |||||| ||||| | || || ||||| ||||| ||||| Sbjct 111904573 AATCCACCACGAAGACGCAGCACAAGGTGAAGGGTGGACTCCTTCTGAATGTTATAGTCA 111904632 Query 34220 GACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACG 34279 | || | | || ||||||||||| ||||| || || | || ||||||||| Sbjct 111904633 GCAAGGGTCCTTCCATCTTCCAACTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGT 111904692 Query 34280 GGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCG 34339 || | | ||||| || ||||| ||| | || | | |||| |||| || Sbjct 111904693 GGGATACCTTCCTTATCCTGAATCTTAGCCTTCACATTGTCAATCGTGTCGGAGCTCTCC 111904752 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCTC 34394 || |||| |||||||| || ||||| | ||| |||||||| ||||||||| ||| Sbjct 111904753 ACCTCCAAGGTGATGGTCTTACCGGTCAAAGTCTTCACAAAAATCTGCATCCCTC 111904807 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 34160 AATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG 34219 ||||| || || || | |||||| ||||| | || || ||||| ||||| ||||| Sbjct 111940904 AATCCACCACGAAGACGCAGCACAAGGTGAAGGGTGGACTCCTTCTGAATGTTATAGTCA 111940963 Query 34220 GACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACG 34279 | || | | || ||||||||||| ||||| || || | || ||||||||| Sbjct 111940964 GCAAGGGTCCTTCCATCTTCCAACTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGT 111941023 Query 34280 GGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCG 34339 || | | ||||| || ||||| ||| | || | | |||| |||| || Sbjct 111941024 GGGATACCTTCCTTATCCTGAATCTTAGCCTTCACATTGTCAATCGTGTCGGAGCTCTCC 111941083 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCTC 34394 || |||| |||||||| || ||||| | ||| |||||||| ||||||||| ||| Sbjct 111941084 ACCTCCAAGGTGATGGTCTTACCGGTCAAAGTCTTCACAAAAATCTGCATCCCTC 111941138 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | || ||| ||||| | || || ||||| || ||||| |||| | Sbjct 111905032 CCACCACGGAGACGCAACACAAGGTGGAGGGTTGACTCCTTCTGGATATTGTAATCGGCC 111905091 Query 34223 A-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 | | || ||| | || || | ||||||||| || || || |||| |||||||| || Sbjct 111905092 AAGGTG-CGGCCATCCTCGAGCTGCTTGCCGGCAAAGATAAGCCTTTGCTGGTCCGGAGG 111905150 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||| || ||||| ||| | || | | || | |||| || || Sbjct 111905151 GATGCCTTCCTTATCCTGGATCTTGGCCTTAACATTGTCAATGGTGTCGGAGCTCTCTAC 111905210 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||||||||| ||||| || || ||||||||||||||||| Sbjct 111905211 CTCAAGGGTGATGGTTTTTCCGGTAAGGGTCTTCACAAAGATCTGCAT 111905258 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | || ||| ||||| | || || ||||| || ||||| |||| | Sbjct 111941363 CCACCACGGAGACGCAACACAAGGTGGAGGGTTGACTCCTTCTGGATATTGTAATCGGCC 111941422 Query 34223 A-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 | | || ||| | || || | ||||||||| || || || |||| |||||||| || Sbjct 111941423 AAGGTG-CGGCCATCCTCGAGCTGCTTGCCGGCAAAGATAAGCCTTTGCTGGTCCGGAGG 111941481 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||| || ||||| ||| | || | | || | |||| || || Sbjct 111941482 GATGCCTTCCTTATCCTGGATCTTGGCCTTAACATTGTCAATGGTGTCGGAGCTCTCTAC 111941541 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||||||||| ||||| || || ||||||||||||||||| Sbjct 111941542 CTCAAGGGTGATGGTTTTTCCGGTAAGGGTCTTCACAAAGATCTGCAT 111941589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323066066277920