Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq3 105 5e-18 seq10 93.3 3e-14 >seq3 Length=135057546 Score = 105 bits (116), Expect = 5e-18 Identities = 97/123 (79%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 || ||||| || || ||| || | |||||||||||||| || ||||| ||||||||| Sbjct 4745777 CAGTTTTATGTAGCAAATGGGGAGCTCTCGTGTCAAATGTACCAGCGATCTGCTGATATG 4745718 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550 || |||||||| || || ||||||||| ||||||||| | || | |||||||| ||| Sbjct 4745717 GGCCTGGGTGTGCCATTTAATATTGCATCTTATGCGCTCTTGACATGCATGATTGCTCAT 4745658 Query 20551 GTT 20553 ||| Sbjct 4745657 GTT 4745655 >seq10 Length=109463236 Score = 93.3 bits (102), Expect = 3e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 20430 CCAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATAT 20489 ||| || || || || ||| || || || |||||||||||||||||||| ||||| || Sbjct 106175361 CCAGTTCTATGTAGCAAATGGGGAGTTATCATGTCAAATGTATCAACGATCTGCTGACAT 106175420 Query 20490 GGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACA 20549 ||| || || || || || ||||||||| |||||| || || || | || ||||| || Sbjct 106175421 GGGCCTAGGCGTGCCATTTAATATTGCATCTTATGCCCTCCTGACCTGCATAATTGCTCA 106175480 Query 20550 TGTT 20553 |||| Sbjct 106175481 TGTT 106175484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399176668362115