Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq3 105 5e-18 seq9 84.2 2e-11 seq7 82.4 6e-11 >seq3 Length=135057546 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 ||| |||| ||| ||||| ||||| || ||||||||||| ||||| | ||| ||| ||| Sbjct 22723525 AAGCACCAAGTGGAGTGTGGATTCCTTCTGAATGTTGTAATCGGCAAGGGTTCTACCATC 22723584 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||| | |||||| || ||| | ||||| ||||| || || || | ||||| ||||| Sbjct 22723585 TTCAAGTTGTTTTCCGGCAAAAATAAGCCTTTGCTGGTCAGGAGGGATTCCTTCTTTATC 22723644 Query 18233 GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 ||||| |||||| | ||| || || || |||| ||||||| | Sbjct 22723645 CTGAATTTTGGCCTTGACATTATCAATTGTATCGGAACTTTCCACCTCAAGGGTGATGGT 22723704 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| ||||| ||||| || || |||||||| Sbjct 22723705 CTTGCCCGTCAAGGTTTTCACGAAGATTTGCAT 22723737 >seq9 Length=120672674 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 18097 ATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGG 18156 |||| || || || | || || | |||||| || || || || |||||||| ||||| | Sbjct 111904574 ATCCACCACGAAGACGCAGCACAAGGTGAAGGGTGGACTCCTTCTGAATGTTATAGTCAG 111904633 Query 18157 CCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGG 18216 | | || | | ||||||||| || || || ||| |||| | || || || ||| | Sbjct 111904634 CAAGGGTCCTTCCATCTTCCAACTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTG 111904693 Query 18217 GCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | | ||||||||||| ||| | ||| || | ||| ||||| | ||| Sbjct 111904694 GGATACCTTCCTTATCCTGAATCTTAGCCTTCACATTGTCAATCGTGTCGGAGCTCTCCA 111904753 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||||||| | || |||||||| || || |||||||| ||||| Sbjct 111904754 CCTCCAAGGTGATGGTCTTACCGGTCAAAGTCTTCACAAAAATCTGCAT 111904802 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| ||||| || || || || || ||||| ||||||| || | ||| || Sbjct 111905278 ACCAAGTGGAGTGTGGACTCCTTCTGGATATTGTAATCGGCCAAGGTGCGGCCATCCTCG 111905337 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 | || ||||| || ||||||| ||||| || ||| || | |||||||||||| Sbjct 111905338 AGCTGCTTGCCGGCGAAGATAAGCCTTTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGG 111905397 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| ||||| | ||| |||| ||||||| |||| Sbjct 111905398 ATCTTCGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCTACCTCAAGGGTGATGGTTTTT 111905457 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| | || |||||||| || ||||| Sbjct 111905458 CCGGTAAGGGTCTTTACAAAGATCTGCAT 111905486 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 18097 ATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGG 18156 |||| || || || | || || | |||||| || || || || |||||||| ||||| | Sbjct 111940905 ATCCACCACGAAGACGCAGCACAAGGTGAAGGGTGGACTCCTTCTGAATGTTATAGTCAG 111940964 Query 18157 CCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGG 18216 | | || | | ||||||||| || || || ||| |||| | || || || ||| | Sbjct 111940965 CAAGGGTCCTTCCATCTTCCAACTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTG 111941024 Query 18217 GCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | | ||||||||||| ||| | ||| || | ||| ||||| | ||| Sbjct 111941025 GGATACCTTCCTTATCCTGAATCTTAGCCTTCACATTGTCAATCGTGTCGGAGCTCTCCA 111941084 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||||||| | || |||||||| || || |||||||| ||||| Sbjct 111941085 CCTCCAAGGTGATGGTCTTACCGGTCAAAGTCTTCACAAAAATCTGCAT 111941133 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| ||||| || || || || || ||||| ||||||| || | ||| || Sbjct 111941609 ACCAAGTGGAGTGTGGACTCCTTCTGGATATTGTAATCGGCCAAGGTGCGGCCATCCTCG 111941668 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 | || ||||| || ||||||| ||||| || ||| || | |||||||||||| Sbjct 111941669 AGCTGCTTGCCGGCGAAGATAAGCCTTTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGG 111941728 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| ||||| | ||| |||| ||||||| |||| Sbjct 111941729 ATCTTCGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCTACCTCAAGGGTGATGGTTTTT 111941788 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| | || |||||||| || ||||| Sbjct 111941789 CCGGTAAGGGTCTTTACAAAGATCTGCAT 111941817 >seq7 Length=79126724 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||||| || || | |||| ||||||||| || || ||||| |||||||||||||| Sbjct 37588218 TCCTCCCCTGAGCCTCAAAACCAAGTGAAGTGTCGACTCCTTTTGTATGTTGTAGTCGGC 37588159 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | || | |||||||| || ||||||||| |||| || || || || || || Sbjct 37588158 AAGAGTGCGCCCATCTTCCAGCTGCTTGCCCGCAAAGATCAGCCTCTGCTGGTCAGGTGG 37588099 Query 18218 CACGCCTTCCTTATC 18232 | || |||||||| Sbjct 37588098 GATACCCTCCTTATC 37588084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379337032754715