Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq6 163 3e-35 seq3 104 2e-17 seq5 93.3 4e-14 seq4 93.3 4e-14 seq9 89.7 5e-13 >seq6 Length=112752717 Score = 163 bits (180), Expect = 3e-35 Identities = 403/605 (67%), Gaps = 11/605 (2%) Strand=Plus/Minus Query 57537 AGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAA 57596 ||||| |||||| || || |||| || || || ||| | |||||||| || || || Sbjct 97172796 AGATTCTGCATGTTCCCAATCCAATACCCTGAGATATGGGAAATGTACAAGAAAGCGGAG 97172737 Query 57597 GCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCC 57656 |||||||| ||||| | || ||||| ||||| || || | || | ||||| || Sbjct 97172736 GCATCGTTCTGGACAGCGGAGGAAGTTGACCTTTCCGGCGACATCCGCCACTGGGAATCT 97172677 Query 57657 CTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGAT 57716 |||| || ||| | | ||||| | ||||| | || || |||||||||||||| Sbjct 97172676 CTCACCGACGGCGAGCGCCACTTTATCACTCACGTCCTTGCCTTCTTCGCCGCATCCGAC 97172617 Query 57717 GGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCG 57776 || || || |||||| | | || ||| || | || || || || | ||||| Sbjct 97172616 GGCATCGTCCTGGAGAATCTTGCCGGAAGGTTCATGAAGGAGGTTCAGGTCGCCGAGGCA 97172557 Query 57777 AGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTA 57836 | ||| ||||| || || | || || || ||| | || ||||| ||||| || Sbjct 97172556 CGCGCCTTCTACGGCTTCCAGATCGCAATCGAGAACATCCACTCAGAGATGTACAGCCTC 97172497 Query 57837 CTCATCGATACGTACGTGAAGGAC--AAC-GACGAGAAACGTAGACTGTTCAACGCGATC 57893 || |||| || ||| | || ||| | | || |||| ||| || ||| |||| || Sbjct 97172496 CTTCTCGAAACTTACATCAAAGACTCATCAGAGAAGAATCGT---CTCTTCCACGCAATT 97172440 Query 57894 GAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCC 57953 || || | || | ||||| || |||||| | | |||||| | || | Sbjct 97172439 GAGACCGTTCCTTGTGTAAAGAAGAAAGCTGAGTGGGCCCTACGATGGATCGATGGCTCA 97172380 Query 57954 ACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCG 58013 | ||||||| || | | ||||||||||| ||||||||| || ||||| || Sbjct 97172379 ---GAATCGTTCGCGGAACGCATCGTCGCGTTCGCCTGCGTCGAAGGGATCTTCTTCTCC 97172323 Query 58014 GGCAGCTT-TGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTT 58072 || ||||| ||| | ||||||||| |||| || || || | ||||| || | || || Sbjct 97172322 GGGAGCTTCTGCT-CGATATTTTGGCTGAAAAAGCGTGGGTTAATGCCAGGTTTAACCTT 97172264 Query 58073 TAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTA 58132 ||||||||||| ||||| || || || ||||| ||||| |||||| | |||| Sbjct 97172263 CTCGAACGAGTTGATCTCGCGAGATGAAGGCCTCCACTGCGATTTCGCGTGCTTGCTGTA 97172204 Query 58133 CTCTC 58137 ||||| Sbjct 97172203 CTCTC 97172199 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||||| || || || ||||| || | || || || || Sbjct 25199979 ATGCAGATTTTCGTGAAGACTCTAACCGGGAAGACGATAACGCTAGAGGTGGAGAGTTCT 25199920 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | | || | || || || ||| || ||||| || || | || || ||||| Sbjct 25199919 GATACTATTGATAATGTGAAGGCAAAGA-TACAGGACA--GAGGGGATTCCACCGGACCA 25199863 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||||||||| || ||||| || ||| | || ||| ||| || |||||| || Sbjct 25199862 GCAGCGTCTAATCTTTGCTGGGAAGCAGCTTGAGGACGGACGCACTCTGGCCGATTACAA 25199803 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||||||| || || || || ||||| || || || || | |||||| Sbjct 25199802 CATTCAAAAGGAGTCCACCCTCCATCTTGTTCTCAGGCTCCGTGGCGGT 25199754 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| || || || || || || |||||||| | || |||||| | || Sbjct 25200436 CATGCAGATCTTCGTCAAAACCCTAACCGGAAAGACGATCACTCTGGAGGTTGAATCCTC 25200377 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | || || | || ||||| |||||| | || ||||| || Sbjct 25200376 CGACACAATCGACAACGTGAAGGCCAAGATTCAAGACAAAGAAGGCATTCCTCCCGATCA 25200317 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| || |||||| | || || | || | |||||| || Sbjct 25200316 GCAGCGACTCATCTTCGCCGGGAAACAGCTAGAGGATGGTCGCACCCTCGCCGATTACAA 25200257 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||||||| || || || || || || || || Sbjct 25200256 CATTCAAAAGGAGTCCACGCTCCACCTTGTTCT 25200224 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || || ||||| || ||||| ||| | || || || | ||| Sbjct 25200663 ATGCAGATCTTCGTGAAAACCCTAACAGGGAAGACGATTACCTTGGAGGTGGAGTCCTCC 25200604 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | || || | || |||||||||||| | ||||| |||||| Sbjct 25200603 GATACCATCGACAATGTGAAGGCTAAGATCCAAGACAAGGAAGGCATCCCGCCGGACCAG 25200544 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| || || ||| | |||||| | || | ||| ||||| Sbjct 25200543 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAAGACGGTCGCACCCTTGCCGACTATAAT 25200484 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || || || || || || || || Sbjct 25200483 ATCCAGAAGGAGTCCACGCTCCACCTCGTCCT 25200452 >seq3 Length=135057546 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 |||| ||||| || ||||| || || || || || || || |||||| |||| || || Sbjct 124352526 CAAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATCACCCTCGAGGTGGAGT 124352585 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||||| |||| | ||||| | || ||||||||||||| | || || | Sbjct 124352586 CTTCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCACCGG 124352645 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 ||||||||||||| || ||||| ||||| ||| | || ||| | || | ||| | Sbjct 124352646 ACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCGCCGACT 124352705 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 | ||||| || || ||||| || || || || || || Sbjct 124352706 ACAACATCCAGAAGGAATCCACCCTCCACCTTGTCCT 124352742 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||||||||||||||| |||| || ||||| |||||| | || || ||| | || Sbjct 22723510 CATGCAAATTTTCGTAAAGACCTTGACTGGGAAAACCATCACCTTAGAGGTGGAATCCTC 22723451 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | |||||| | ||| ||||| || || | || || ||||| Sbjct 22723450 GGACACCATTGACAATGTCAAAGCCAAAATCCAAGACAAAGAGGGTATCCCACCTGACCA 22723391 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATA 31370 |||| | | || || ||||| || ||| | || || | ||| | ||| ||||| | Sbjct 22723390 GCAGAGGTTGATTTTTGCTGGGAAGCAGCTTGAGGATGGAAGGAC-ACTAGCAGATTACA 22723332 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||||| || || || || ||||| |||| || Sbjct 22723331 ACATTCAGAAGGAGTCAACGCTTCACTTGGTGCT 22723298 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || ||||| ||||| || || || || || | || || ||| || Sbjct 22722597 ATGCAAATTTTTGTGAAGACCCTGACGGGGAAGACCATTACTTTGGAGGTCGAAAGCTCT 22722538 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | || || || || ||||||||| || | || ||||| ||| Sbjct 22722537 GATACCATTGATAATGTGAAGGCGAAGATTCAGGACAAGGAGGGTATTCCCCCCGATCAG 22722478 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATAA 31371 ||| | || || || ||||||||||| ||||| || | || || ||| || ||||| Sbjct 22722477 CAGAGGCTCATCTTTGCTGGCAAACAATTGGAGGATGGTCGTAC-ATTAGCAGACTATAA 22722419 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || ||||| |||||||| || ||||| || ||| Sbjct 22722418 TATCCAAAAGGAATCGACCCTCCATCTTGTCCTT 22722385 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || || || || || || |||| || || || Sbjct 124960105 ATGCAAATCTTCGTCAAGACCCTCACCGGAAAGACCATTACTCTCGAGGTCGAGAGTTCT 124960046 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || ||| || |||||||| | || ||||||||| Sbjct 124960045 GACACCATCGATAATGTGAAGGCGAAAATTCAAGATAAGGAAGGGATCCCTCCCGACCAG 124959986 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||||||||| ||||| || |||||| |||| || Sbjct 124959985 CAGCGTCTAATCTTCGCCGGAAAACAGCTGGAGGA 124959951 >seq5 Length=110037037 Score = 93.3 bits (102), Expect = 4e-14 Identities = 154/221 (70%), Gaps = 1/221 (0%) Strand=Plus/Plus Query 31184 GAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTT 31243 ||| |||| ||||| |||||||| || || || || || || || |||||| | || || Sbjct 23423035 GAAGCAAA-ATGCAGATTTTCGTGAAAACCCTAACGGGGAAGACCATCACCCTTGAGGTG 23423093 Query 31244 GAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCG 31303 ||| | ||||||| |||| | || || | || ||||| ||||| | ||| Sbjct 23423094 GAATCTTCCGACACCATCGACAACGTGAAGGCCAAGATCCAAGACAAAGAAGGAATCCCG 23423153 Query 31304 CCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC 31363 || ||||||||||| || || ||||| || || ||| | || ||| || | | Sbjct 23423154 CCGGACCAGCAGCGCCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACACTCGCC 23423213 Query 31364 GATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| ||||| || |||||||| || || ||||| || || Sbjct 23423214 GATTACAACATCCAGAAAGAATCCACGCTCCATCTCGTCCT 23423254 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| || |||||| |||| || || || || ||| | || || || || Sbjct 20100672 CATGCAGATTTTTGTTAAGACTTTGACTGGGAAGACCATTACCCTTGAGGTGGAGAGCTC 20100613 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | |||||| | || ||||||||| || | || || ||||| Sbjct 20100612 CGACACCATTGACAATGTCAAAGCCAAGATTCAGGACAAGGAGGGGATTCCCCCGGACCA 20100553 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || ||||| || || ||||||||||| | ||| | ||||| || Sbjct 20100552 GCAGAGGTTGATCTTCGCCGGGAAGCAGTTGGAAGATGGAAGGACCCTTGCTGATTACAA 20100493 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| || || || |||||||| || || ||| Sbjct 20100492 TATTCAGAAGGAGTCCACTCTTCACCTTGTGCTT 20100459 >seq4 Length=123556382 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || ||||| || || || || || || || |||||| | || || || | Sbjct 120131429 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATCACCCTGGAGGTGGAGTC 120131370 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||| |||| | || || | || ||||||||||||| | || || || Sbjct 120131369 TTCCGACACCATCGACAACGTGAAGGCCAAGATTCAGGACAAGGAAGGCATCCCTCCGGA 120131310 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||||||||| || ||||| ||||| ||| |||| ||| || | ||| || Sbjct 120131309 CCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTCGCCGACTA 120131250 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || ||||| || || || || || || Sbjct 120131249 CAACATCCAGAAGGAATCCACCCTCCACCTCGTCCT 120131214 >seq9 Length=120672674 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || || || || ||||| |||| || || || Sbjct 111905942 ATGCAAATCTTCGTTAAGACCCTCACCGGGAAGACTATCACTCTCGAAGTCGAGAGCTCA 111905883 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| |||| | | || ||| | | ||||||||||| | || || ||||| Sbjct 111905882 GACACCATCGACAACGTTAAGGCAAAGATTCAAG-ACAAGGAAGGCATCCCCCCGGACCA 111905824 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| | || ||| || | || || || Sbjct 111905823 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACACTCGCTGACTACAA 111905764 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || ||||| || ||||| || || || Sbjct 111905763 CATCCAGAAGGAATCAACCCTTCACCTTGTCCT 111905731 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || || || || ||||| |||| || || || Sbjct 111942273 ATGCAAATCTTCGTTAAGACCCTCACCGGGAAGACTATCACTCTCGAAGTCGAGAGCTCA 111942214 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| |||| | | || ||| | | ||||||||||| | || || ||||| Sbjct 111942213 GACACCATCGACAACGTTAAGGCAAAGATTCAAG-ACAAGGAAGGCATCCCCCCGGACCA 111942155 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| | || ||| || | || || || Sbjct 111942154 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACACTCGCTGACTACAA 111942095 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || ||||| || ||||| || || || Sbjct 111942094 CATCCAGAAGGAATCAACCCTTCACCTTGTCCT 111942062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445758002875440