Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq6 152 6e-32 seq3 93.3 5e-14 >seq6 Length=112752717 Score = 152 bits (168), Expect = 6e-32 Identities = 410/618 (66%), Gaps = 12/618 (2%) Strand=Plus/Plus Query 33574 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAA 33633 ||| ||| || |||||||||||||| || || || |||| || || ||||| || | Sbjct 97172205 ACAGCAAGCACGCGAAATCGCAGTGGAGGCCTTCATCTCGCGAGATCAACTCGTTCGAGA 97172264 Query 33634 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGG 33693 | || | || ||||||| ||||||||||| ||||||||||| || ||| |||| Sbjct 97172265 AGGTTAAACCTGGCATTAACCCACGCTTTTTCAGCCAAAATATCGAGCAGAAGCTCCCGG 97172324 Query 33694 AAAAGAAGATTCCTTCTACTGCA-GCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT- 33751 | |||||||| ||||| || ||| || || || | | | ||| | || || Sbjct 97172325 AGAAGAAGATCCCTTCGAC-GCAGGCGAACGC--GACGATGCGTTCCGCGAACGATTCTG 97172381 Query 33752 -GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 33810 | ||| ||||| | | ||||| || || ||||| ||||||||||| | || || | Sbjct 97172382 AGCCATCGATCCATCGTAGGGCCCACTCAGCTTTCTTCTTTACACAAGGAACGGTCTCAA 97172441 Query 33811 TGGCATTAAAGAGATAGtttttttCATTACTA-TCTTTAACATAAGTATCGATCAAAAGA 33869 | || | |||||| || || || | | | ||||| | ||||| |||| | || Sbjct 97172442 TTGCGTGGAAGAGACGATTCTTCTC-TGATGAGTCTTTGATGTAAGTTTCGAGAAGGAGG 97172500 Query 33870 CTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 33929 || ||||| || || || ||||| || || || ||||| || |||||||| | ||| Sbjct 97172501 CTGTACATCTCTGAGTGGATGTTCTCGATTGCGATCTGGAAGCCGTAGAAGGCGCGTGCC 97172560 Query 33930 TCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCA 33989 |||| | ||| || || | || | | | || | ||| || || || || || Sbjct 97172561 TCGGCGACCTGAACCTCCTTCATGAACCTTCCGGCAAGATTCTCCAGGACGATGCCGTCG 97172620 Query 33990 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--TGGTGTTAGTT 34047 || || || || || | || || | ||||| | ||| | |||| || | Sbjct 97172621 GATGCGGCGAAGAAGGCAAGGACGTGAGTGATAAAGTGGCGCTCGCCGTCGGTGAGAGAT 97172680 Query 34048 TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 34107 | ||| | ||| || || | || ||||| ||| ||||||| || ||||||| Sbjct 97172681 --TCCCAGTGGCGGATGTCGCCGGAAAGGTCAACTTCCTCCGCTGTCCAGAACGATGCCT 97172738 Query 34108 CTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTAT 34167 | || || || ||||| | ||| || ||| | |||||||||||||| || ||||| | Sbjct 97172739 CCGCTTTCTTGTACATTTCCCATATCTCAGGGTATTGGATTGGGAACATGCAGAATCTGT 97172798 Query 34168 TTGGATTTGGTGCAAGGA 34185 || ||||| ||||||| Sbjct 97172799 CAGGGTTTGGAGCAAGGA 97172816 >seq3 Length=135057546 Score = 93.3 bits (102), Expect = 5e-14 Identities = 144/201 (72%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 63662 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63721 |||||| ||||| || | || || ||||| || || |||||| ||| ||| | | | Sbjct 112999173 AGTTCCAGCATTGAAAAGTGTTGGGGAAGCATGAGTGAACCATCTTTGAGACATCATGTG 112999114 Query 63722 GTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTA 63780 ||| || | ||| || ||||| || | ||| |||||||| || || || | ||| | Sbjct 112999113 GTAAGTTCTGACAGCAGATTCTATGTCATCCTTG-TGAATTCCAACAGCAACCCTCATCA 112999055 Query 63781 ACATGTGCTGAGGTCTTTCAACAA--TTTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63838 |||||||||| || ||||| |||| ||| ||| | ||||| | |||||| | || Sbjct 112999054 ACATGTGCTGGGGCCTTTCCACAACCTTTCCTTGA--ACCTTCAAGAGGTAGGACCTCTC 112998997 Query 63839 CAAAGTTTTAAAACCAAAATA 63859 || |||||||||||||| || Sbjct 112998996 CAGGGTTTTAAAACCAAAGTA 112998976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629805735810960