Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 9e-15 seq9 91.5 1e-13 >seq3 Length=135057546 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || || |||| || || | ||| | ||| |||||| || | |||||||| | Sbjct 22722827 CCACCTCGGAGTCGCAAAACAAGATGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCA 22722886 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || | | | || ||||| || || || ||||| || | || ||| ||||| | || Sbjct 22722887 AGGGTCCTTCCATCCTCCAACTGCTTACCAGCAAAGATAAGTCTCTGCTGATCAGGTGGG 22722946 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||| ||||| || ||| ||||||| || ||| |||||| || ||||| Sbjct 22722947 ATACCCTCTTTGTCTTGGATTTTTGCTTTGACATTGTCAATTGTGTCCGAAGATTCGACC 22723006 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | ||||| || ||||||||||| || || ||||| |||||||| Sbjct 22723007 TCCAGGGTTATTGTCTTTCCGGTTAGTGTCTTGACAAAGATTTGCAT 22723053 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 |||||||| | ||| || || | |||||||| | || |||||||||||||| ||||| Sbjct 22722407 TCCTTTTGGATATTATAGTCTGCTAATGTACGACCATCCTCCAATTGTTTGCCAGCAAAG 22722466 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCT 43037 || | | ||| ||||||| || | ||| || || || ||| ||| | | || || | Sbjct 22722467 ATGAGCCTCTGCTGATCGGGGGGAATACCCTCCTTGTC-CTGAATCTTCGCCTTCACATT 22722525 Query 43038 GCCAACTGTGTCGCCAGC-CTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCA 43096 ||| || || ||| ||||| || | || || || || || || || || |||| Sbjct 22722526 ATCAATGGTATC-AGAGCTTTCGACCTCCAAAGTAATGGTCTTCCCCGTCAGGGTCTTCA 22722584 Query 43097 CAAAAATTTGCAT 43109 ||||||||||||| Sbjct 22722585 CAAAAATTTGCAT 22722597 >seq9 Length=120672674 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| ||||| || | || ||||| |||| ||| |||||| || | ||||||||||| Sbjct 111905259 GCCACCACGAAGCCGCAAGACCAAGTGGAGTGTGGACTCCTTCTGGATATTGTAATCGGC 111905318 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 ||| || || | || || | || |||||||| || || | | || || || | || Sbjct 111905319 CAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATAAGCCTTTGCTGGTCCGGAGG 111905378 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGA 43060 | ||||| || || |||| | | ||||| || ||| |||||| ||| ||| | Sbjct 111905379 GATGCCTTCCTTATCCTGGATCTTCGCCTTGACGTTGTCAATGGTGTCG-GAGCTCTCTA 111905437 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | || | || || ||||||||||| || || || ||||| || ||||| Sbjct 111905438 CCTCAAGGGTGATGGTTTTTCCGGTAAGGGTCTTTACAAAGATCTGCAT 111905486 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| ||||| || | || ||||| |||| ||| |||||| || | ||||||||||| Sbjct 111941590 GCCACCACGAAGCCGCAAGACCAAGTGGAGTGTGGACTCCTTCTGGATATTGTAATCGGC 111941649 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 ||| || || | || || | || |||||||| || || | | || || || | || Sbjct 111941650 CAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATAAGCCTTTGCTGGTCCGGAGG 111941709 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGA 43060 | ||||| || || |||| | | ||||| || ||| |||||| ||| ||| | Sbjct 111941710 GATGCCTTCCTTATCCTGGATCTTCGCCTTGACGTTGTCAATGGTGTCG-GAGCTCTCTA 111941768 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | || | || || ||||||||||| || || || ||||| || ||||| Sbjct 111941769 CCTCAAGGGTGATGGTTTTTCCGGTAAGGGTCTTTACAAAGATCTGCAT 111941817 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| ||||| || || || ||||| |||| ||| |||||| || | ||| ||||||| Sbjct 111905487 GCCACCACGAAGCCTCAAGACCAAGTGGAGTGTGGACTCCTTCTGGATATTATAATCGGC 111905546 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 | ||| || | || || | || ||||||||||| || | | ||| ||||| | || Sbjct 111905547 GAGTGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGATCCGGAGG 111905606 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGA 43060 | ||||| || || |||| | ||||| || | | ||| ||| ||| ||||| Sbjct 111905607 GATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATTGTATCG-GAGCTCTCGA 111905665 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | || | || || || |||||||| || || || || || || ||||| Sbjct 111905666 CCTCAAGAGTGATGGTCTTTCCGGTGAGGGTCTTAACGAAGATCTGCAT 111905714 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| ||||| || || || ||||| |||| ||| |||||| || | ||| ||||||| Sbjct 111941818 GCCACCACGAAGCCTCAAGACCAAGTGGAGTGTGGACTCCTTCTGGATATTATAATCGGC 111941877 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 | ||| || | || || | || ||||||||||| || | | ||| ||||| | || Sbjct 111941878 GAGTGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGATCCGGAGG 111941937 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGA 43060 | ||||| || || |||| | ||||| || | | ||| ||| ||| ||||| Sbjct 111941938 GATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATTGTATCG-GAGCTCTCGA 111941996 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | || | || || || |||||||| || || || || || || ||||| Sbjct 111941997 CCTCAAGAGTGATGGTCTTTCCGGTGAGGGTCTTAACGAAGATCTGCAT 111942045 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| ||||| || | ||||| | |||| || |||||| || | ||||||||||| Sbjct 111905031 GCCACCACGGAGACGCAACACAAGGTGGAGGGTTGACTCCTTCTGGATATTGTAATCGGC 111905090 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 ||| || || | || || | || ||||||||||| || | | || || || | || Sbjct 111905091 CAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATAAGCCTTTGCTGGTCCGGAGG 111905150 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGA 43060 | ||||| || || |||| | || || || ||| |||||| ||| ||| | Sbjct 111905151 GATGCCTTCCTTATCCTGGATCTTGGCCTTAACATTGTCAATGGTGTCG-GAGCTCTCTA 111905209 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | || | || || ||||||||||| || || |||||||| || ||||| Sbjct 111905210 CCTCAAGGGTGATGGTTTTTCCGGTAAGGGTCTTCACAAAGATCTGCAT 111905258 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| ||||| || | ||||| | |||| || |||||| || | ||||||||||| Sbjct 111941362 GCCACCACGGAGACGCAACACAAGGTGGAGGGTTGACTCCTTCTGGATATTGTAATCGGC 111941421 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 ||| || || | || || | || ||||||||||| || | | || || || | || Sbjct 111941422 CAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATAAGCCTTTGCTGGTCCGGAGG 111941481 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGA 43060 | ||||| || || |||| | || || || ||| |||||| ||| ||| | Sbjct 111941482 GATGCCTTCCTTATCCTGGATCTTGGCCTTAACATTGTCAATGGTGTCG-GAGCTCTCTA 111941540 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | || | || || ||||||||||| || || |||||||| || ||||| Sbjct 111941541 CCTCAAGGGTGATGGTTTTTCCGGTAAGGGTCTTCACAAAGATCTGCAT 111941589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381362595551406