Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1 143 4e-30 seq2 118 2e-22 seq4 109 9e-20 seq7 105 1e-18 >seq1 Length=107035537 Score = 143 bits (158), Expect = 4e-30 Identities = 192/267 (72%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||||| || || | ||| | ||||||||||| || ||||||||||| || || Sbjct 91465333 GCTAAGCGCCACCGTAAGGTTCTGAGGGATAACATCCAGGGTATCACCAAGCCCGCCATT 91465392 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||| || | |||||||| ||||||||| || || | |||| || |||| Sbjct 91465393 CGCCGTCTTGCAAGGCGTGGTGGTGTCAAGCGTATCAGCGGTCTCATCTACGAGGAGACA 91465452 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||| | ||||||||||| ||| ||| || | ||||| | || |||||| Sbjct 91465453 CGTGGCGTTCTCAAGATCTTCCTTGAGAACGTCATTCGCGATGCCGTTACTTACACCGAG 91465512 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||| |||||||| || || |||||||| ||||||| ||| | || | || ||| Sbjct 91465513 CACGCTCGCCGTAAGACAGTTACTGCCATGGATGTCGTCTACGCACTCAAGAGGCAGGGC 91465572 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | ||||| |||||| | ||| Sbjct 91465573 AGGACCCTCTATGGATTTGGAGGCTAA 91465599 Score = 136 bits (150), Expect = 6e-28 Identities = 198/280 (71%), Gaps = 0/280 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 ||||||||||| || | || | ||||||||||| || |||||||| || || || Sbjct 91463907 GCTAAGCGTCACCGTAAGGTACTGAGGGATAACATCCAGGGTATCACCAAACCCGCCATT 91463966 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||| || | ||||| || || |||||| || || | | || || || | Sbjct 91463967 CGCCGTCTCGCAAGGCGTGGCGGTGTGAAGCGTATCAGCGGTCTCATTTACGAGGAAACA 91464026 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| |||| | ||||||||||| ||| ||| || | ||| || | ||| || ||| Sbjct 91464027 CGTGGTGTTCTCAAGATCTTCCTTGAGAACGTCATTCGTGACGCCGTGACCTACACTGAG 91464086 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||| || ||||| || || |||||||| ||||||||||| | || | |||||| Sbjct 91464087 CACGCTCGCCGCAAGACAGTTACTGCCATGGATGTCGTCTATGCACTCAAGAGGCAAGGC 91464146 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAATCAAA 16712 | | | |||||||||||| | ||| | || ||||| Sbjct 91464147 AGGACTCTCTATGGTTTTGGAGGCTAAACCTCATCTCAAA 91464186 Score = 131 bits (144), Expect = 3e-26 Identities = 189/267 (71%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| || |||| ||| ||||||||||||| || ||||| ||||| || || Sbjct 91479134 GCAAAGCGCCACCGCAAGGTTCTGAGAGATAACATCCAGGGTATCACGAAGCCCGCCATT 91479193 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||| || | |||||||| ||||||||| | || | |||| || |||| Sbjct 91479194 CGCCGTCTCGCAAGGCGTGGTGGCGTCAAGCGTATTAGCGGCCTCATCTACGAGGAGACA 91479253 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || | ||||||||||| ||| ||| || | |||||| | ||| || ||| Sbjct 91479254 CGTGGCGTCCTCAAGATCTTCCTTGAGAACGTCATTCGTGATGCCGTTACCTACACTGAG 91479313 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || ||| || |||||||||||| |||||||| | ||||| || | || | || ||| Sbjct 91479314 CATGCTCGCCGCAAGACTGTCACCGCCATGGATGTTGTCTACGCCCTCAAGAGGCAGGGC 91479373 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | || || |||||| | ||| Sbjct 91479374 AGGACACTCTACGGATTTGGAGGCTAA 91479400 >seq2 Length=93869048 Score = 118 bits (130), Expect = 2e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| |||||||| || |||||||| || || || || || ||||||||||| | || Sbjct 22845763 CTTCGTGATAACATTCAGGGAATCACGAAACCCGCCATTCGCCGTCTGGCTCGCAGGGGA 22845704 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || |||||| | || ||| | ||||||| |||| |||| ||| | ||||||||| Sbjct 22845703 GGCGTCAAGAGAATCAGTGGCCTCATCTATGAGGAGACACGTGGCGTTCTCAAGATCTTC 22845644 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 | ||| |||||| | ||||| | ||| |||||||||||| || || || || Sbjct 22845643 TTGGAGAACGTTATTCGGGATGCCGTTACCTACACCGAGCACGCTCGCCGCAAAACCGTT 22845584 Query 16634 ACCTCCATGGATATCGTCTATGC 16656 || |||||||| | || ||||| Sbjct 22845583 ACTGCCATGGATGTTGTTTATGC 22845561 Score = 105 bits (116), Expect = 1e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| |||||||| || |||||||| || || || || || ||| ||||||| | || Sbjct 22954996 CTTCGTGATAACATTCAGGGAATCACGAAACCCGCCATTCGCCGTTTGGCTCGCAGGGGA 22954937 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || |||||| | || ||| | ||||||| |||| |||| || | ||||||||| Sbjct 22954936 GGCGTCAAGAGAATCAGTGGCCTCATCTATGAGGAGACACGTGGCGTCCTCAAGATCTTC 22954877 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 | ||| ||| || | ||||| | ||| |||||||||||| || || || || Sbjct 22954876 TTGGAGAACGTCATTCGCGATGCCGTTACCTACACCGAGCACGCTCGCCGCAAAACCGTT 22954817 Query 16634 ACCTCCATGGATATCGTCTATGC 16656 || |||||||| | || ||||| Sbjct 22954816 ACTGCCATGGATGTTGTTTATGC 22954794 >seq4 Length=123556382 Score = 109 bits (120), Expect = 9e-20 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| |||||||| ||||||||||| || || || || || ||| ||||||| | || Sbjct 2690182 CTTCGTGATAACATTCAAGGAATCACGAAACCCGCCATTCGCCGTTTGGCTCGCAGGGGA 2690241 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || |||||| | || || | ||||||| |||| |||| || | ||||||||| Sbjct 2690242 GGCGTCAAGAGGATCAGCGGTCTCATCTATGAGGAGACACGTGGCGTCCTCAAGATCTTC 2690301 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 | ||| ||| || | ||||| | ||| |||||||||||| || || || || Sbjct 2690302 TTGGAGAACGTCATTCGCGATGCCGTTACCTACACCGAGCACGCTCGCCGCAAAACCGTT 2690361 Query 16634 ACCTCCATGGATATCGTCTATGC 16656 || |||||||| |||| ||||| Sbjct 2690362 ACTGCCATGGATGTCGTTTATGC 2690384 >seq7 Length=79126724 Score = 105 bits (116), Expect = 1e-18 Identities = 168/241 (70%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||| || |||||||| || |||||||| ||||| || || || | || || | | || Sbjct 27692333 TCTCCGCGATAACATTCAGGGAATCACGAAGCCTGCGATTCGGAGGCTAGCGAGAAGAGG 27692274 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||| || || || || ||| ||| |||||||||||| ||||| |||| | |||||||| Sbjct 27692273 TGGCGTGAAACGAATCAGTGGTTTGATCTATGAAGAGACTCGTGGTGTTCTTAAGATCTT 27692214 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 | ||| ||| || | |||||| | || || |||||||| | | ||||| || Sbjct 27692213 TTTGGAGAACGTGATTCGTGATGCGGTGACATACACGGAGCACGCAAGGAGGAAGACGGT 27692154 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || |||||||| | || || || |||| | || || | | | ||||| ||||| Sbjct 27692153 GACGGCCATGGATGTTGTTTACGCTCTGAAGAGGCAGGGAAGGACCCTCTATGGGTTTGG 27692094 Query 16693 A 16693 | Sbjct 27692093 A 27692093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073822139351