Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq6 113 4e-20 seq3 95.1 1e-14 seq5 89.7 5e-13 seq4 86.0 6e-12 >seq6 Length=112752717 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| |||| ||||| ||||||| | || | ||||| | Sbjct 25200435 ATGCAGATCTTCGTCAAAACCCTAACCGGAAAGACGATCACTCTGGAGGTTGAATCCTCC 25200376 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || |||||| ||||||||||| || ||||||||||| Sbjct 25200375 GACACAATCGACAACGTGAAGGCCAAGATTCAAGACAAAGAAGGCATTCCTCCCGATCAG 25200316 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||||||| | || ||| ||||| || || |||| | | | | || ||| || ||| Sbjct 25200315 CAGCGACTCATCTTCGCCGGGAAACAGCTAGAGGATGGTCGCACCCTCGCCGATTACAAC 25200256 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||| || || || |||| || || || Sbjct 25200255 ATTCAAAAGGAGTCCACGCTCCACCTTGTTCT 25200224 >seq3 Length=135057546 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | || || ||||| |||| || || | |||||| |||| | || || Sbjct 124352528 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATCACCCTCGAGGTGGAGTCT 124352587 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 |||||||||||| | ||||| ||||| ||||| ||||| || || || || Sbjct 124352588 TCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCACCGGAC 124352647 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || | ||||| | || |||||| || ||||| || | | | | | || |||||| Sbjct 124352648 CAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCGCCGACTAC 124352707 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || ||||| || |||| || ||||| Sbjct 124352708 AACATCCAGAAGGAATCCACCCTCCACCTTGTCCT 124352742 >seq5 Length=110037037 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 26762 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGA 26821 || ||||||||| | || || ||||| |||| || || | |||||| | || | || Sbjct 23423036 AAGCAAAATGCAGATTTTCGTGAAAACCCTAACGGGGAAGACCATCACCCTTGAGGTGGA 23423095 Query 26822 ATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCC 26881 ||| |||||||||||| | || || ||||| ||||||||||| || || || Sbjct 23423096 ATCTTCCGACACCATCGACAACGTGAAGGCCAAGATCCAAGACAAAGAAGGAATCCCGCC 23423155 Query 26882 CGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGA 26941 || || || | ||||| | || ||| || || || || || | | | || ||| Sbjct 23423156 GGACCAGCAGCGCCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACACTCGCCGA 23423215 Query 26942 CTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||| || |||||||| || ||||||| ||||| Sbjct 23423216 TTACAACATCCAGAAAGAATCCACGCTCCATCTCGTCCT 23423254 >seq4 Length=123556382 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | || || ||||| |||| || || | |||||| | || | || || Sbjct 120131428 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATCACCCTGGAGGTGGAGTCT 120131369 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 |||||||||||| | || || |||||| ||||| ||||| || ||||| || Sbjct 120131368 TCCGACACCATCGACAACGTGAAGGCCAAGATTCAGGACAAGGAAGGCATCCCTCCGGAC 120131309 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || | ||||| | || |||||| || || || || | | | | || |||||| Sbjct 120131308 CAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTCGCCGACTAC 120131249 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || ||||| || |||| || ||||| Sbjct 120131248 AACATCCAGAAGGAATCCACCCTCCACCTCGTCCT 120131214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478653383197040