Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq6 104 2e-17 seq5 86.0 5e-12 seq4 86.0 5e-12 seq3 86.0 5e-12 seq9 82.4 7e-11 >seq6 Length=112752717 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| |||| ||||| |||| || | || || || || | Sbjct 25200435 ATGCAGATCTTCGTCAAAACCCTAACCGGAAAGACGATCACTCTGGAGGTTGAATCCTCC 25200376 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || |||||| |||||||||||||| ||||||||||| Sbjct 25200375 GACACAATCGACAACGTGAAGGCCAAGATTCAAGACAAAGAAGGCATTCCTCCCGATCAG 25200316 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| |||| || | || ||| || || || || |||| | | | || |||||| ||| Sbjct 25200315 CAGCGACTCATCTTCGCCGGGAAACAGCTAGAGGATGGTCGCACCCTCGCCGATTACAAC 25200256 Query 24171 ATTCAAAAAGAATCTAC 24187 |||||||| || || || Sbjct 25200255 ATTCAAAAGGAGTCCAC 25200239 >seq5 Length=110037037 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | |||||||| | || || |||| |||||| | Sbjct 20101583 ATGCAAATCTTCGTGAAGACCCTCACTGGAAAGACCATCACTCTCGAGGTCGAGAGTTCC 20101524 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||| ||| || || ||||| || || || ||||| Sbjct 20101523 GACACCATCGATAACGTCAAGGCAAAAATTCAAGATAAGGAAGGGATCCCACCGGATCAG 20101464 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | ||||| | || ||| ||||||||||| || | | | | | | ||| || ||| Sbjct 20101463 CAACGTCTGATCTTCGCCGGAAAGCAACTCGAGGACGGCCGCACCTTGGCCGACTACAAC 20101404 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || ||||| || Sbjct 20101403 ATCCAGAAGGAATCCAC 20101387 >seq4 Length=123556382 Score = 86.0 bits (94), Expect = 5e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || ||||| | || || ||||| |||| || || | || ||| | || || ||| | Sbjct 120131428 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATCACCCTGGAGGTGGAGTCT 120131369 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 |||||||||||| | || || |||||| ||||| |||||||| ||||| || Sbjct 120131368 TCCGACACCATCGACAACGTGAAGGCCAAGATTCAGGACAAGGAAGGCATCCCTCCGGAC 120131309 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || ||| | || || | || ||||||||| || || || | | | | | || ||| || Sbjct 120131308 CAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTCGCCGACTAC 120131249 Query 24168 AACATTCAAAAAGAATCTAC 24187 ||||| || || ||||| || Sbjct 120131248 AACATCCAGAAGGAATCCAC 120131229 >seq3 Length=135057546 Score = 86.0 bits (94), Expect = 5e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || ||||| | || || ||||| |||| || || | || ||| |||| || ||| | Sbjct 124352528 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATCACCCTCGAGGTGGAGTCT 124352587 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 |||||||||||| | ||||| ||||| ||||| |||||||| || || || Sbjct 124352588 TCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCACCGGAC 124352647 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || ||| | || || | || ||||||||| ||||| || | | | | || ||| || Sbjct 124352648 CAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCGCCGACTAC 124352707 Query 24168 AACATTCAAAAAGAATCTAC 24187 ||||| || || ||||| || Sbjct 124352708 AACATCCAGAAGGAATCCAC 124352727 >seq9 Length=120672674 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | || || || | || || ||||||||||| | Sbjct 111905942 ATGCAAATCTTCGTTAAGACCCTCACCGGGAAGACTATCACTCTCGAAGTCGAGAGCTCA 111905883 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || ||||||| ||||| |||||||| || || || || Sbjct 111905882 GACACCATCGACAACGTTAAGGCAAAGATTCAAGACAAGGAAGGCATCCCCCCGGACCAG 111905823 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | || ||||||||| ||||| || | | | | || || || ||| Sbjct 111905822 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACACTCGCTGACTACAAC 111905763 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 || || || ||||| || |||| Sbjct 111905762 ATCCAGAAGGAATCAACCCTTCA 111905740 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | || || || | || || ||||||||||| | Sbjct 111942273 ATGCAAATCTTCGTTAAGACCCTCACCGGGAAGACTATCACTCTCGAAGTCGAGAGCTCA 111942214 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || ||||||| ||||| |||||||| || || || || Sbjct 111942213 GACACCATCGACAACGTTAAGGCAAAGATTCAAGACAAGGAAGGCATCCCCCCGGACCAG 111942154 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | || ||||||||| ||||| || | | | | || || || ||| Sbjct 111942153 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACACTCGCTGACTACAAC 111942094 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 || || || ||||| || |||| Sbjct 111942093 ATCCAGAAGGAATCAACCCTTCA 111942071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429928103553585