Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq3 102 7e-17 seq9 86.0 5e-12 >seq3 Length=135057546 Score = 102 bits (112), Expect = 7e-17 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA--GTCCA 115343 |||||||| || || ||||| | ||||| || ||||| ||| | || ||| || | Sbjct 22723737 ATGCAAATCTTCGTGAAAACCTTGACGGGCAAGACCATCACCCTTGAGGTGGAAAGTTC- 22723679 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 ||| || ||| | || || |||||| ||||||||||| |||| ||| | Sbjct 22723678 -CGATACAATTGATAATGTCAAGGCCAAAATTCAGGATAAAGAAGGAATCCCTCCTGACC 22723620 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 ||||||| ||||||| ||| || |||||| | ||||||| | |||| | |||||||| | Sbjct 22723619 AGCAAAGGCTTATTTTTGCCGGAAAACAACTTGAAGATGGTAGAACCCTTGCCGATTACA 22723560 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||||||| || || || || | || ||||| Sbjct 22723559 ACATTCAGAAGGAATCCACACTCCACTTGGTG 22723528 >seq9 Length=120672674 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| || || || || ||||||||||| ||| | || ||| | | Sbjct 111905258 ATGCAGATCTTTGTGAAGACCCTTACCGGAAAAACCATCACCCTTGAGGTAGAGAGCTCC 111905199 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| || ||||| || || || || ||||| |||||| |||| || || Sbjct 111905198 GACACCATT-GACAATGTTAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCGGACCA 111905140 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| ||||| | ||| ||||| || | || |||| | ||| |||||||||| || Sbjct 111905139 GCAAAGGCTTATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGATTACAA 111905080 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 || || || ||||| || | || | |||||| Sbjct 111905079 TATCCAGAAGGAGTCAACCCTCCACCTTGTGTTG 111905046 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| || || || || ||||||||||| ||| | || ||| | | Sbjct 111941589 ATGCAGATCTTTGTGAAGACCCTTACCGGAAAAACCATCACCCTTGAGGTAGAGAGCTCC 111941530 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| || ||||| || || || || ||||| |||||| |||| || || Sbjct 111941529 GACACCATT-GACAATGTTAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCGGACCA 111941471 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| ||||| | ||| ||||| || | || |||| | ||| |||||||||| || Sbjct 111941470 GCAAAGGCTTATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGATTACAA 111941411 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 || || || ||||| || | || | |||||| Sbjct 111941410 TATCCAGAAGGAGTCAACCCTCCACCTTGTGTTG 111941377 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| || || || || ||||||||||| ||| | || ||| | | Sbjct 111905486 ATGCAGATCTTTGTAAAGACCCTTACCGGAAAAACCATCACCCTTGAGGTAGAGAGCTCC 111905427 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| || ||||| || || || || ||||| |||||| |||| || || Sbjct 111905426 GACACCATT-GACAACGTCAAGGCGAAGATCCAGGATAAGGAAGGCATCCCTCCGGACCA 111905368 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| ||||| | || ||||| || | || |||| | ||| |||||||||| || Sbjct 111905367 GCAAAGGCTTATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGATTACAA 111905308 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 || || || ||||| || | || |||| ||| Sbjct 111905307 TATCCAGAAGGAGTCCACACTCCACTTGGTCTTG 111905274 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| || || || || ||||||||||| ||| | || ||| | | Sbjct 111941817 ATGCAGATCTTTGTAAAGACCCTTACCGGAAAAACCATCACCCTTGAGGTAGAGAGCTCC 111941758 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| || ||||| || || || || ||||| |||||| |||| || || Sbjct 111941757 GACACCATT-GACAACGTCAAGGCGAAGATCCAGGATAAGGAAGGCATCCCTCCGGACCA 111941699 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| ||||| | || ||||| || | || |||| | ||| |||||||||| || Sbjct 111941698 GCAAAGGCTTATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGATTACAA 111941639 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 || || || ||||| || | || |||| ||| Sbjct 111941638 TATCCAGAAGGAGTCCACACTCCACTTGGTCTTG 111941605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425336187892840