Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq6 163 3e-35 seq2 91.5 2e-13 seq3 89.7 6e-13 seq8 87.8 2e-12 seq7 86.0 7e-12 seq9 82.4 9e-11 >seq6 Length=112752717 Score = 163 bits (180), Expect = 3e-35 Identities = 397/595 (67%), Gaps = 15/595 (3%) Strand=Plus/Plus Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141 ||||| |||||||| || ||| || | ||||| ||||| || |||||||| || Sbjct 97172203 GTACAGCAAGCACGCGAAATCGCAGTGGAGGCCTTCATCTCGCGAGATCAACTCGTTCGA 97172262 Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA-AAACTAC 93200 ||| ||||||||||| | | || || || || ||||||||||| | |||| || || | Sbjct 97172263 GAAGGTTAAACCTGGCATTAACCCACGCTTTTTCAGCCAAAATATCG-AGCAGAAGCTCC 97172321 Query 93201 CAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAA--ATT-TG 93257 | || || || || ||||| ||| || || || || || ||||| || || ||| || Sbjct 97172322 CGGAGAAGAAGATCCCTTCGACGCAGGCGAACGCGACGATGCGTTCCGCGAACGATTCTG 97172381 Query 93258 CGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTG 93317 | || ||||||| || ||||| || ||||| ||||| | |||||| | | Sbjct 97172382 AGCCAT------CGATCCATCGTAGGGCCCACTCAGCTTTCTTCTTTACACAAGGAACGG 97172435 Query 93318 TTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTA 93377 | || || |||| || || || ||| || ||| ||||| || |||| | Sbjct 97172436 TCTCAATTGCGTGGAAGAGACGATTCTTCTCTGATGAGTCTTTGATGTAAGTTTCGAGAA 97172495 Query 93378 ACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATC 93437 || ||||| || || |||| ||||| ||||| || ||||| |||||||| | Sbjct 97172496 GGAGGCTGTACATCTCTGAGTGGATGTTCTCGATTGCGATCTGGAAGCCGTAGAAGGCGC 97172555 Query 93438 TAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATAC 93497 || || | || ||| || || | || || | | ||||| || ||| || | Sbjct 97172556 GTGCCTCGGCGACCTGAACCTCCTTCATGAACCTTCCGGCAAGATTCTCCAGGACGATGC 97172615 Query 93498 CATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA 93557 | |||||||| || || || || | | || | ||||| || ||| | || | | Sbjct 97172616 CGTCGGATGCGGCGAAGAAGGCAAGGACGTGAGTGATAAAGTGGCGCTCGCCGTCGGTGA 97172675 Query 93558 GCTTATCCCAAT--CGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGA 93615 | ||||| | ||||| || ||||| || ||||| || | ||||| ||||| Sbjct 97172676 GAGATTCCCAGTGGCGGAT--GTCGCCGGAAAGGTCAACTTCCTCCGCTGTCCAGAACGA 97172733 Query 93616 TGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATG 93670 ||| || ||||| |||||||| |||||||| || | ||||| ||||| || ||| Sbjct 97172734 TGCCTCCGCTTTCTTGTACATTTCCCATATCTCAGGGTATTGGATTGGGAACATG 97172788 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/85 (84%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||| | || || | || Sbjct 17584572 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGC 17584513 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 |||||||| || ||||| |||||| Sbjct 17584512 GTGGGTTCAAATCCCACTTCTGACA 17584488 Score = 86.0 bits (94), Expect = 7e-12 Identities = 79/99 (80%), Gaps = 6/99 (6%) Strand=Plus/Plus Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA-- 126320 || |||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || Sbjct 67534339 ACTGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGTGAGA 67534396 Query 126321 --GCGTGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 |||||||||| || ||||| |||||| ||| || || Sbjct 67534397 GGGCGTGGGTTCAAATCCCACTTCTGACATATTTTTGTT 67534435 >seq2 Length=93869048 Score = 91.5 bits (100), Expect = 2e-13 Identities = 83/103 (81%), Gaps = 5/103 (5%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 84922227 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 84922170 Query 126328 TTCGAACCCCACACCTGACAAATTATTATTGGAATTTTTGTTG 126370 ||| || |||||| ||| |||| |||| || |||||| ||| Sbjct 84922169 TTCAAATCCCACAGCTGTCAAAGTATTCTT---ATTTTTTTTG 84922130 Score = 84.2 bits (92), Expect = 2e-11 Identities = 75/92 (82%), Gaps = 3/92 (3%) Strand=Plus/Plus Query 126257 CTATTTACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTC 126316 |||| || || ||| |||||||||||||||||||||||||||||| | |||||| || Sbjct 92639498 CTATATA-AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGA 92639554 Query 126317 GGGAGCGTGGGTTCGAACCCCACACCTGACAA 126348 | |||||||||| || |||||| ||| ||| Sbjct 92639555 AAGGGCGTGGGTTCAAATCCCACAGCTGTCAA 92639586 >seq3 Length=135057546 Score = 89.7 bits (98), Expect = 6e-13 Identities = 84/105 (80%), Gaps = 3/105 (3%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGG--TTCCCTCGGGAGCG 126323 |||||| ||||||||||||||||||||||||| | ||| ||||| ||| | | ||| Sbjct 126056883 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGAAAGAGGGCG 126056942 Query 126324 TGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTTGT 126368 ||||||| || ||||| ||||| |||||||| | ||| ||||| Sbjct 126056943 TGGGTTCAAATCCCACTTCTGAC-AATTATTACTTTAATCTTTGT 126056986 >seq8 Length=49462234 Score = 87.8 bits (96), Expect = 2e-12 Identities = 72/87 (83%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--GC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||| | | | || || Sbjct 2522279 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCGTGTGAGGGC 2522220 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 |||||||| || ||||| |||||||| Sbjct 2522219 GTGGGTTCAAATCCCACTTCTGACAAA 2522193 >seq7 Length=79126724 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGCG 126323 |||||| ||||||||||||||||||||||||| | ||| |||||| | || || | ||| Sbjct 5839022 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGCG 5839081 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 ||||||| || ||||| |||||| Sbjct 5839082 TGGGTTCAAATCCCACTTCTGACA 5839105 >seq9 Length=120672674 Score = 82.4 bits (90), Expect = 9e-11 Identities = 72/89 (81%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||| | || || || Sbjct 101948920 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAAGGC 101948979 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATT 126351 |||||||| || | ||| ||||||| || Sbjct 101948980 GTGGGTTCAAATCTCACTTCTGACAATTT 101949008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556850310134680