Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq3 113 3e-20 >seq3 Length=135057546 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | ||||| || |||||||| ||||| ||| | || |||| | Sbjct 22723737 ATGCAAATCTTCGTGAAAACCTTGACGGGCAAGACCATCACCCTTGAGGTGGAAAGTTCC 22723678 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| |||||| |||||||| || | ||| |||| Sbjct 22723677 GATACAATTGATAATGTCAAGGCCAAAATTCAGGATAAAGAAGGAATCCCTCCTGACCAG 22723618 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || || ||||| ||||| || |||||||| |||||| | ||| | ||||||||||| Sbjct 22723617 CAAAGGCTTATTTTTGCCGGAAAACAACTTGAAGATGGTAGAACCCTTGCCGATTACAAC 22723558 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||||||||||| || || || |||| | |||||| |||| || Sbjct 22723557 ATTCAGAAGGAATCCACACTCCACTTGGTGCTTCGTTTAAGAGGTGG 22723511 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || ||| |||| || || || || ||| |||| ||| | | Sbjct 22723053 ATGCAAATCTTTGTCAAGACACTAACCGGAAAGACAATAACCCTGGAGGTCGAATCTTCG 22722994 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAAC 21950 || || | | | || | || |||||| || ||||||||| | ||||| | Sbjct 22722993 GACACAATTGACAATGTCAAAGCAAAAATCCAAGACAAAGAGGGTATCCCACCTG---AT 22722937 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || |||||||||||||||||||| || || | || ||| || || | || |||||| Sbjct 22722936 CAGCAGAGACTTATCTTTGCTGGTAAGCAGTTGGAGGATGGAAGGACCCTTGCTGATTAC 22722877 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 || ||||||||||| || || | ||| | || || || | ||||| ||| Sbjct 22722876 AACATTCAGAAGGAGTCCACCTTGCATCTTGTTTTGCGACTCCGAGGTGGA 22722826 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | || || || || || |||||||| ||| | || |||| || | Sbjct 22723509 ATGCAAATTTTCGTAAAGACCTTGACTGGGAAAACCATCACCTTAGAGGTGGAATCCTCG 22723450 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAAC 21950 || || | | | || | || ||||| || ||||||||| | ||||| || Sbjct 22723449 GACACCATTGACAATGTCAAAGCCAAAATCCAAGACAAAGAGGGTATCCCACCTG---AC 22723393 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || ||||| | || |||||||| || || || || ||| || || | || |||||| Sbjct 22723392 CAGCAGAGGTTGATTTTTGCTGGGAAGCAGCTTGAGGATGGAAGGACACTAGCAGATTAC 22723333 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || ||||||||||| || || ||||| |||| | ||||| |||| || Sbjct 22723332 AACATTCAGAAGGAGTCAACGCTTCACTTGGTGCTCCGTTTGAGAGGTGG 22723283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358118222478478